DRSC/TRiP Functional Genomics Resources

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Protein Alignment tut and rbm47

DIOPT Version :10

Sequence 1:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001135499.1 Gene:rbm47 / 100216039 XenbaseID:XB-GENE-976707 Length:412 Species:Xenopus tropicalis


Alignment Length:213 Identity:47/213 - (22%)
Similarity:87/213 - (40%) Gaps:48/213 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 ELFLSCIPRNHSCSPRWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYL--- 99
            |:|:..|||:  .....:|.|....|.::.||..:||.|.:||||::.:......:.|::.|   
 Frog    72 EVFVGKIPRD--VYEDELVPVFESAGRIFEMRLMMDFDGKNRGYAFVMFTKKHEAKQAVRELNNY 134

  Fly   100 ---PMRFRQLCMCLRVEPSTNNRELVLKNVESSLRPWQVYQEMLKIHPFTI-VRVYEYQLDQF-- 158
               |.|...:| |     |.:|..|.:..:....:..::.:|:.|:....: |.||....|:.  
 Frog   135 EIRPGRLLGVC-C-----SVDNCRLFIGGIPKMKKREEILEEISKVTEGVLDVIVYASAADKMKN 193

  Fly   159 --FYIFEYRNNDSAASAHQRVR-NSIRKFGEHAHISWL-------------------------TA 195
              |...||.::.:||.|.:::. ..|:.:|....:.|.                         |:
 Frog   194 RGFAFVEYESHRAAAMARRKLMPGRIQLWGHQIAVDWAEPEIDVDEDVMETVKILYVRNLMIETS 258

  Fly   196 ENILSRASGSF---CFQR 210
            |:.:.:..|.|   |.:|
 Frog   259 EDTIKKIFGQFNPGCVER 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:409695 23/82 (28%)
rbm47NP_001135499.1 hnRNP-R-Q 13..>378 CDD:273732 47/213 (22%)

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