DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12081 and Lztr1

DIOPT Version :10

Sequence 1:NP_572494.1 Gene:CG12081 / 31799 FlyBaseID:FBgn0030053 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001259114.1 Gene:Lztr1 / 31037 FlyBaseID:FBgn0040344 Length:998 Species:Drosophila melanogaster


Alignment Length:348 Identity:95/348 - (27%)
Similarity:146/348 - (41%) Gaps:99/348 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 HALNAH------TMRWTLVPQQLDDAGVPLKYPLVPFQRYGHTVVAYKDRIYIWGGRNDENLCNT 104
            :|||..      |.:||.:.:..:..|.         :|..||||||||.::::||.|.:|:.|.
  Fly   223 NALNVDFTSYTATHQWTRMLECAEFVGA---------KRSKHTVVAYKDAMFVFGGDNGKNMLND 278

  Fly   105 LYCFDPKTAQWSRPQVTGCLPGARDGHSACVIGNSMYIFGGFVDEIN------------------ 151
            |..|..|...|.|...||..|..|..|||.|.|:||:||||:..:|:                  
  Fly   279 LIRFGVKDKSWGRACATGTPPAPRYHHSAVVAGSSMFIFGGYTGDIHSNSNLTNKNDLFEYKFQS 343

  Fly   152 ------EFS-------------------------------SDVHSLNL-DTMEWRYVQTFG-VPP 177
                  :||                               :|:.:||| ...:|..|...| .||
  Fly   344 AMWVEWKFSGRQPVPRSAHGAAVYDNKMWIYAGYDGNARLNDMWTLNLTGENQWEEVDQLGDRPP 408

  Fly   178 SYRDFHASVAYEQERMYIFGGRGDKHSPYHSQEETYCHEIVYLDMKTKVWHR----PFTAG--KV 236
            :..:|..:||  ::.||:|.|:....         ..:.:.....||:.|.|    |...|  ..
  Fly   409 TCCNFPVAVA--RDAMYVFSGQSGLQ---------ITNSLFEFHFKTRTWRRISNEPVLRGATSA 462

  Fly   237 PVGRR-SHSMFVYNKLIYVFGGYNGLLDQHF-NDLYTFDPRTKLWNLIR--ANGKAPTARRRQCA 297
            |..|| .|:|..:::.:||||   |..|... |||:.:|..:::|::|:  .|...|:.|....:
  Fly   463 PPSRRYGHTMVHHDRFLYVFG---GSADSTLPNDLHCYDLDSQVWSVIQPEQNSDVPSGRVFHAS 524

  Fly   298 IVMGTRMFLFGGT---SPRSGSS 317
            .|:...|::||||   |.|.|.:
  Fly   525 AVICDAMYIFGGTVDNSVRRGDT 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12081NP_572494.1 NanM 13..306 CDD:442289 88/332 (27%)
KELCH repeat 13..69 CDD:276965 7/28 (25%)
KELCH repeat 78..125 CDD:276965 21/46 (46%)
KELCH repeat 128..170 CDD:276965 20/97 (21%)
KELCH repeat 180..236 CDD:276965 13/61 (21%)
Lztr1NP_001259114.1 NanM 252..551 CDD:442289 88/310 (28%)
KELCH repeat 252..298 CDD:276965 21/45 (47%)
KELCH repeat 302..355 CDD:276965 15/52 (29%)
KELCH repeat 359..407 CDD:276965 7/47 (15%)
KELCH repeat 410..455 CDD:276965 11/55 (20%)
KELCH repeat 467..509 CDD:276965 15/44 (34%)
BTB1_POZ_LZTR1 551..704 CDD:349617
BACK1_LZTR1 708..766 CDD:350580
BTB2_POZ_LZTR1 781..906 CDD:349618
BACK2_LZTR1 902..962 CDD:350581
Blue background indicates that the domain is not in the aligned region.

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