DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and Prss41

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001128559.1 Gene:Prss41 / 681033 RGDID:1584711 Length:324 Species:Rattus norvegicus


Alignment Length:277 Identity:88/277 - (31%)
Similarity:139/277 - (50%) Gaps:48/277 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   315 SATCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNALKF-LCGGSLIHSRYVITSAHC-- 376
            |..||......:|:|||:|:.:|.:||.|:|        ...|| .|||||:..|:|:|:|||  
  Rat    42 SMPCGRRNDIRSRIVGGIESVRGRWPWQASL--------RLRKFHRCGGSLLSHRWVLTAAHCFR 98

  Fly   377 --INPMLTLVRLGAHDLSQPA----ESGAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGALPG 435
              ::|....|:|| ...|:|:    |:.:...|::..:::....|.  .:|:||:.|........
  Rat    99 KFLDPKKWTVQLG-QLTSKPSFWNREAFSGRYRVKDIIINSEDKLK--YHDLALLRLASSVTYNK 160

  Fly   436 NISPIC-LPEAAKFMQQDFVGMNPFVAGWGAVK----------HQGVTSQVLRDAQVPIVSRHSC 489
            .|.|:| ||.|:....|.    ..:|.||||::          |       ||:.||.:::...|
  Rat   161 FIQPVCVLPSASMSQHQP----RCWVTGWGALQEDLKPLPPPYH-------LREVQVTVLNLSRC 214

  Fly   490 EQSYKSIFQFVQFSDKVLCAGS--SSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARP 552
            ::.:....::...:..|.|||:  .|.|.|.|||||||:. .::|   .:|.:|:||.|..|.||
  Rat   215 QELFSFASRYHLITRDVFCAGAEDGSADTCSGDSGGPLVC-NMDG---LWYQIGIVSRGVGCGRP 275

  Fly   553 NFPGVYTRVASYVPWIK 569
            ..||:||.|:.:..|||
  Rat   276 KLPGIYTNVSHHYDWIK 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440
Tryp_SPc 328..571 CDD:238113 84/264 (32%)
Prss41NP_001128559.1 Tryp_SPc 55..292 CDD:238113 82/262 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.