DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and CG13318

DIOPT Version :9

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_649831.1 Gene:CG13318 / 41048 FlyBaseID:FBgn0037627 Length:405 Species:Drosophila melanogaster


Alignment Length:484 Identity:128/484 - (26%)
Similarity:185/484 - (38%) Gaps:146/484 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 STTSSTTSTTGLTTTTTAGTTLP--LPMPTCPSQPLVCLTGGARPLPNCPCIDPRQQQNSPLLSS 164
            |...||.:.|.|......||.||  :...|.|..|.:...|.:    .|.|:.|....| ||  .
  Fly    47 SDVGSTANHTILARQLIVGTLLPPQVAPGTWPPVPSIVSPGTS----YCQCVPPGSCAN-PL--P 104

  Fly   165 TGPQIGSDMMVFMPLNSGRRRRRRRRPQSCQDARSRPGSCLPLTSCPQLMQEYQGQANEFHTFLG 229
            |.|..||..:....:|:|                ..|  .:|.||                   .
  Fly   105 TAPSDGSGQIDIRIVNNG----------------GYP--TVPTTS-------------------S 132

  Fly   230 QSICGFDGSTFMVCCATDRSGNARSRKDVFVTTAAPFGFFHFSPLSGGSTATPMVFQPTPPLSQV 294
            ...|.:.   .:.||                              ..||......|         
  Fly   133 TLTCSYG---LVACC------------------------------QAGSYQCGRRF--------- 155

  Fly   295 VSPSFYPPPPPPPPNNAPRESATCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNALKFL 359
                   ||||.....||.                   :|..|||||.|||      ...|..:|
  Fly   156 -------PPPPGSTTAAPG-------------------QASFGAYPWQAAL------LTTADVYL 188

  Fly   360 CGGSLIHSRYVITSAHCI-NPMLTL--VRLGAHDLSQPAES-GAMDLRIRRTVVHEHFDLNSISN 420
            .||:||.:::|:|:||.: |..||.  ||||..|.:..:|. .|.|:.|....|:..|:.|::.|
  Fly   189 GGGALITAQHVLTAAHKVYNLGLTYFKVRLGEWDAASTSEPIPAQDVYISNVYVNPSFNPNNLQN 253

  Fly   421 DIALIELNVVGAL--PGNISPICLPEAAKFMQQDFVGMNPFVAGWGAVKHQ----GVTSQVLRDA 479
            |:|:::|:...:|  ...:..:|||..:      |||...:|||||  |:.    |....:.|..
  Fly   254 DVAILKLSTPVSLTSKSTVGTVCLPTTS------FVGQRCWVAGWG--KNDFGATGAYQAIERQV 310

  Fly   480 QVPIVSRHSCE---QSYKSIFQFVQFSDKVLCA-GSSSVDACQGDSGGPLMMPQLEGNVYRFYLL 540
            .||::...:|:   |:.:....||......:|| |.:..|||.||.|.||:.  ....|:  |::
  Fly   311 DVPLIPNANCQAALQATRLGSSFVLSPTSFICAGGEAGKDACTGDGGSPLVC--TSNGVW--YVV 371

  Fly   541 GLVSFGYECARPNFPGVYTRVASYVPWIK 569
            |||::|..||:...||||..|.:|:|||:
  Fly   372 GLVAWGIGCAQAGVPGVYVNVGTYLPWIQ 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:288855 5/49 (10%)
Tryp_SPc 327..568 CDD:214473 85/254 (33%)
Tryp_SPc 328..571 CDD:238113 87/256 (34%)
CG13318NP_649831.1 Tryp_SPc 169..402 CDD:238113 87/250 (35%)
Tryp_SPc 169..399 CDD:214473 85/247 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.