DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and CG4927

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_001033953.1 Gene:CG4927 / 36852 FlyBaseID:FBgn0034139 Length:362 Species:Drosophila melanogaster


Alignment Length:399 Identity:101/399 - (25%)
Similarity:151/399 - (37%) Gaps:100/399 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 GSC--LPLTSCPQLMQEYQGQANEFHTFLGQSICGF-DGSTFMVCCATDRSGNARSRKDVFVTTA 263
            |.|  |..|.||.:.         |:..|.::...: |.|..:|||....:...:|::     .:
  Fly    27 GECKELSATDCPSIF---------FNLHLIRNFVKYCDKSNHIVCCLLPNNMQPQSQQ-----FS 77

  Fly   264 APFGFFHFSPLSGGSTATPMVFQPTPPLSQVVSPSFYPPPPPPPPNNAPRESATCGISGATSNRV 328
            |..|...|                                     ....|.......|..|:..:
  Fly    78 ANIGLRRF-------------------------------------EKECRRFNEIRTSCRTTPFI 105

  Fly   329 VGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITSAHCINPMLT----------- 382
            |||.:|....:|::|.||. ...|.:.:.:.||..:||.::|:|:|||:....|           
  Fly   106 VGGAKAAGREFPFMALLGQ-RGKNSSQIDWDCGAIIIHPKFVLTAAHCLETSETKEQRLDPNYDG 169

  Fly   383 ---LVRLGAHDLSQPAESG-AMDLRIRRTVVH----EHFDLNSISNDIALIELNVVGALPGNISP 439
               :||||..|.:...:.. ..|.|:...|||    |..|..|..||||::||.:.......::|
  Fly   170 PKYVVRLGELDYNSTTDDAQPQDFRVLNYVVHPAYGEDDDTGSRKNDIAVVELEMEATFSEYVAP 234

  Fly   440 ICLPEAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQSYKSIFQFVQFSD 504
            .|||......|     :....|||||....|..|..|....:.......|.|         :...
  Fly   235 ACLPLDGGNEQ-----LQVAAAGWGATSESGHASSHLLKVSLDRYDVAECSQ---------RLEH 285

  Fly   505 KV-----LCAG--SSSVDACQGDSGGPLMMPQLEGNVYRF--YLLGLVSFGYECARPNFPGVYTR 560
            |:     ||||  |:|.|.|.||||||:.   ::..:|..  .::|:.|:|..|.....|.|||:
  Fly   286 KIDVRTQLCAGSRSTSADTCYGDSGGPVF---VQHPIYSCLKQVIGITSYGLVCGVQGLPSVYTK 347

  Fly   561 VASYVPWIK 569
            |..|..||:
  Fly   348 VHLYTDWIE 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440 11/44 (25%)
Tryp_SPc 328..571 CDD:238113 81/270 (30%)
CG4927NP_001033953.1 Tryp_SPc 105..358 CDD:238113 81/270 (30%)

Return to query results.
Submit another query.