DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and Tmprss11b

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_063129516.1 Gene:Tmprss11b / 365265 RGDID:1303278 Length:420 Species:Rattus norvegicus


Alignment Length:265 Identity:95/265 - (35%)
Similarity:137/265 - (51%) Gaps:38/265 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 PRESATCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNRNALKFLCGGSLIHSRYVITSAHC 376
            ||.|       ||.:|:.||..|:||.:||.|:|       |...|..||.|||..|:::|:|||
  Rat   180 PRMS-------ATYDRITGGSTAQKGEWPWQASL-------RVNGKHHCGASLIGERFLLTAAHC 230

  Fly   377 I----NPMLTLVRLGAHDLSQPAESGAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGALPGNI 437
            .    ||....|..|..  ..||   .|...:...::||.:......:|:|:|:|....:...::
  Rat   231 FLRTNNPKNLTVSFGTR--VTPA---YMQHYVEEVIIHEDYVKGQHHDDVAIIKLTEKVSFRNDV 290

  Fly   438 SPICLPEAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSC--EQSYKSIFQFV 500
            ..:|||||.:....   |....|.|||::.:.|.:..:|:.|.:.|:..::|  |::|..     
  Rat   291 HRVCLPEATQVFPP---GEGVVVTGWGSLSYNGKSPLLLQKASIKIIDTNACNSEEAYGG----- 347

  Fly   501 QFSDKVLCAG--SSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARPNFPGVYTRVAS 563
            :..|.:||||  ...||||||||||||:.|....   .:||:|:||:|:||.|.|.||||.||.|
  Rat   348 RIMDTMLCAGYMEGYVDACQGDSGGPLVHPNSRD---IWYLVGIVSWGHECGRVNKPGVYMRVTS 409

  Fly   564 YVPWI 568
            |..||
  Rat   410 YRDWI 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440
Tryp_SPc 328..571 CDD:238113 89/249 (36%)
Tmprss11bXP_063129516.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.