DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32260 and Corin

DIOPT Version :10

Sequence 1:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:262 Identity:86/262 - (32%)
Similarity:142/262 - (54%) Gaps:27/262 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 SNRVVGGMEARKGAYPWIAA-LGYFEENNRNALKFLCGGSLIHSRYVITSAHCINPMLTL----- 383
            |.|::||.:|..|.:|::|| ||..|:      .|.|.|.||..::|:|::||:.....:     
  Fly  1101 SRRIIGGTQASPGNWPFLAAILGGPEK------IFYCAGVLISDQWVLTASHCVGNYSVIDLEDW 1159

  Fly   384 -VRLGAHDLSQPAESGAMDLRIRRTVVHEHFDLN-SISNDIALIELNVVGALPGNISPICLPEAA 446
             ::||....:....|| ..::::..:.|..:::. :..|||||.:|....|...::.|:|||..:
  Fly  1160 TIQLGVTRRNSFTYSG-QKVKVKAVIPHPQYNMAIAHDNDIALFQLATRVAFHEHLLPVCLPPPS 1223

  Fly   447 KFMQQDFVGMNPFVAGWGAVKHQGVTS---QVLRDAQVPIVSRHSCEQSYKSIFQFVQFSDKVLC 508
              ::....|....|.|||..:.:...|   .::.:.||||::|:.|::...::    ..|:.::|
  Fly  1224 --VRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEWLDNL----TVSEGMVC 1282

  Fly   509 AG--SSSVDACQGDSGGPLMMPQLEGNVYRFYLLGLVSFGYECARPNFPGVYTRVASYVPWIKKH 571
            ||  ....|||||||||||:.| ..|...|:::.|:||:|..||.|..||||..|..|||||::.
  Fly  1283 AGFDDGGKDACQGDSGGPLLCP-YPGEKNRWFVGGIVSWGIMCAHPRLPGVYANVVQYVPWIQEQ 1346

  Fly   572 IA 573
            ||
  Fly  1347 IA 1348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32260NP_728942.1 CLIP 194..244 CDD:463440
Tryp_SPc 328..571 CDD:238113 82/255 (32%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 82/255 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.