DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otu and Otud3

DIOPT Version :10

Sequence 1:NP_511089.2 Gene:otu / 31789 FlyBaseID:FBgn0003023 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_001364018.1 Gene:Otud3 / 73162 MGIID:1920412 Length:443 Species:Mus musculus


Alignment Length:397 Identity:82/397 - (20%)
Similarity:132/397 - (33%) Gaps:137/397 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QRPITSGSRQAPDP-----------YDQYLESRGLYRKHTARDASSLFRVIAEQMYDTQMLHYEI 59
            :|.:....|..|||           :...|::.||..:....|.:.|||.:.:|:......|.:.
Mouse    30 RRALAKERRNRPDPGGSGCEEEFVSFANQLQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKH 94

  Fly    60 RLECVRFMTLKRRIFEKEIPGD--FDSYMQDMSKPKTYGTMTELRAMSCLYRRNVILYEPYN--- 119
            |.|.|.:|..:|..||..:..|  |:.::..:|||.|:.....:.|.:..::.||:::: .|   
Mouse    95 RQETVDYMIRQREDFEPFVEDDIPFEKHVASLSKPGTFAGNDAIVAFARNHQLNVVIHQ-LNAPL 158

  Fly   120 ---MGTSVVFNR------RYAENF----RVFFNNENHFDSVYDVEYIE----------RAAICQS 161
               .||.....|      ||.|::    |:..|:|.....:.||...:          .|.:|..
Mouse   159 WQIRGTDKGSTRELHIAYRYGEHYDSVRRINDNSEAPAHLLTDVSEAQLLLLSGLQETGAELCPQ 223

  Fly   162 IAFKLLYQKLFKLP-------DVSFAVEI-MLHPHTFNWDRFNVEFDDKGYMVR----------I 208
            ::..   ..|..||       .::.||:. |||....|...   :...||..|:          :
Mouse   224 LSPS---GPLLSLPLREPAIQSIAKAVQFQMLHQDGANKKE---KMKTKGVDVKDGLRDDVEDAV 282

  Fly   209 H-------CTDGRVFKLDLPGDTNCILENYKLCNFH----------------------------- 237
            |       ||           |.|.|::|.:..|::                             
Mouse   283 HKVGSATGCT-----------DFNLIVQNLEAENYNIKSAITALLQVNQGTGNDAEENHEPGDRV 336

  Fly   238 --------------STNGNQSINARKGGRLEIKNQEERKASGSSGHEPNDLLPMCPN-------R 281
                          ..:|||   .|..||:|........|..|..|:..  ||...|       |
Mouse   337 KQRGPSREEAGSGRRLSGNQ---GRNEGRMETSEARASPAEESKAHKSQ--LPKVTNKQRREQQR 396

  Fly   282 LESCVRQ 288
            ||...||
Mouse   397 LEKKKRQ 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otuNP_511089.2 OTU_ALG13-like 21..149 CDD:438590 35/145 (24%)
Tudor_TDRD13-like 336..389 CDD:410451
Otud3NP_001364018.1 OTU_OTUD3 51..195 CDD:438607 35/144 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.