DRSC/TRiP Functional Genomics Resources

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Protein Alignment otu and otud3

DIOPT Version :10

Sequence 1:NP_511089.2 Gene:otu / 31789 FlyBaseID:FBgn0003023 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_998087.1 Gene:otud3 / 405858 ZFINID:ZDB-GENE-040426-2509 Length:357 Species:Danio rerio


Alignment Length:137 Identity:31/137 - (22%)
Similarity:60/137 - (43%) Gaps:15/137 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 YDQYLESRGLYRKHTARDASSLFRVIAEQMYDTQMLHYEIRLECVRFMTLKRRIFEKEIPGD--F 82
            :...|::.||..:....|.:.|||.:.:|:......|..:|.|.|.:|...|..||..:..|  |
Zfish    50 FSNQLQALGLKLREVPGDGNCLFRALGDQLEGHSRGHLHLRQETVHYMRTHRNDFEPFVEDDVPF 114

  Fly    83 DSYMQDMSKPKTYGTMTELRAMS-------CLYRRNVILYEPYNMGTSVVFNRRYAENFRVFFNN 140
            :.::.::|:..|:.....:.|.:       .:::.|..|:| .| ||    .:.......:.:..
Zfish   115 EKHLTNLSQQGTFAGNDAIVAFARSQQLKVVIHQLNAPLWE-IN-GT----EKPSCRELHIAYRY 173

  Fly   141 ENHFDSV 147
            .:|:|||
Zfish   174 GDHYDSV 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otuNP_511089.2 OTU_ALG13-like 21..149 CDD:438590 31/136 (23%)
Tudor_TDRD13-like 336..389 CDD:410451
otud3NP_998087.1 OTU_OTUD3 46..190 CDD:438607 31/137 (23%)
Blue background indicates that the domain is not in the aligned region.

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