DRSC/TRiP Functional Genomics Resources

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Protein Alignment otu and Otud5

DIOPT Version :10

Sequence 1:NP_511089.2 Gene:otu / 31789 FlyBaseID:FBgn0003023 Length:853 Species:Drosophila melanogaster
Sequence 2:XP_006256799.1 Gene:Otud5 / 363452 RGDID:1563027 Length:640 Species:Rattus norvegicus


Alignment Length:213 Identity:51/213 - (23%)
Similarity:94/213 - (44%) Gaps:30/213 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QAPDP---------YDQYL-ESRGLYRKHTARDASSLFRVIAEQMYDTQMLHYEIRLECVRFMTL 69
            :|.||         :::.| :.:|...|....|.:.|||.:|:|:|..|.:|..:|..|:.::..
  Rat   262 EAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMK 326

  Fly    70 KRRIFEKEIPGDFDSYMQDMSKPKTYGTMTELRAMSCLYRRNVILY----EPYNMGTSVVFNRRY 130
            ....|...:..||.:|:....|...:|...|::||:.:|.|.|.:|    ||.|  |....::..
  Rat   327 NADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPIN--TFHGIHQNE 389

  Fly   131 AENFRVFFNNENHFDSVYDVEYIERAAICQSI---AFK------LLYQKLFKLPDVSFAVEIMLH 186
            .|..||.::...|::||.:.   .:|.|...:   :||      .|.:...|..:.|:..:.||.
  Rat   390 DEPIRVSYHRNIHYNSVVNP---NKATIGVGLGLPSFKPGFAEQSLMKNAIKTSEESWIEQQMLE 451

  Fly   187 --PHTFNWDRFNVEFDDK 202
              ....:|:..|...:::
  Rat   452 DKKRATDWEATNEAIEEQ 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otuNP_511089.2 OTU_ALG13-like 21..149 CDD:438590 37/132 (28%)
Tudor_TDRD13-like 336..389 CDD:410451
Otud5XP_006256799.1 OTU_OTUD5-like 285..408 CDD:438589 36/124 (29%)
Blue background indicates that the domain is not in the aligned region.

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