DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otu and duo-1

DIOPT Version :9

Sequence 1:NP_511089.2 Gene:otu / 31789 FlyBaseID:FBgn0003023 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_505931.3 Gene:duo-1 / 179586 WormBaseID:WBGene00001110 Length:877 Species:Caenorhabditis elegans


Alignment Length:646 Identity:117/646 - (18%)
Similarity:208/646 - (32%) Gaps:232/646 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QVQRPITSGSRQAPDPY---DQYL----ESRGL-------YRKHTARDASSLFRVI--AEQMYDT 52
            ::..|..| |:::..|.   |.:|    |:|.|       |...|.:..||...::  .||:|  
 Worm   240 EILEPAQS-SKRSESPLLSSDVFLRKLHENRQLVNTGNSCYYNSTMQAVSSCNPLVIRCEQLY-- 301

  Fly    53 QMLHYEIRLECVRFMTLKRRIFEKEIPGDFDSYMQDMS--KPKTYGTMTELRAMSCLYRRNVILY 115
            :|:...|.|            |:       ||...|.:  |.|.......|:.:.||...    :
 Worm   302 RMVRDNIEL------------FD-------DSMNNDQADIKRKYIVLQNFLKVVICLGWH----F 343

  Fly   116 EPYNMGTSVVFNR----RYAEN---FRVFFNNENHFDSVYDVEYIERAAICQSIAFKLLYQKLFK 173
            ...|.|.|:...|    :|.:|   ....|||::..|                 |.:.|...:..
 Worm   344 NKRNEGKSIELRRYDLLQYRQNVGKINEEFNNDDQQD-----------------AHEFLLTLIGA 391

  Fly   174 LPDVSFAVEIMLHPHTFNWDRFNVEFDDKGYMVRIHCTDGRVFKLDLPGDTNCILENYKLCNFHS 238
            :.|   |:.:|..         ||:..|.   |.|.....|.||:|        :|...:|...|
 Worm   392 VDD---AMGVMSK---------NVKTIDN---VGITLNPARAFKID--------VETMYVCQGCS 433

  Fly   239 TNGNQSINARKGGRLEIKNQEERKASGSSGHEPNDLL-------PM------CPNRL-ESCVRQL 289
            ..           .|::.::.:...|...|.....|:       |:      |.::: .||.|  
 Worm   434 NE-----------ELKVDSRNDLGVSVMDGCSVQKLVSSFVKWSPIEKECSSCKHKISSSCER-- 485

  Fly   290 LDDGISPFP-------------------------------YKVAKSM--------DPYMYRNIEF 315
                ||.||                               :|:..|.        .|.|:.|.|:
 Worm   486 ----ISTFPECLIINLKRYELEGQGPPFSMKKKSCRVEPSFKLDVSSLGNFPPVEHPEMFENKEY 546

  Fly   316 DCWNDMRKE-AKLYNVYINDYNF---KVGAKCKVELPNETEMYTCHVQNISKDKN-YCHVF---- 371
            .....:..| ::|..:..:|.:|   :|..:.......|....:..|:::.|.|. |.::|    
 Worm   547 STTEPVNSEDSRLAEITTDDAHFNDSRVSGRLLGGADEEMSQCSVIVEDVKKRKELYFNIFSNEK 611

  Fly   372 -----VERIG-------------KEIVVPYESLH--PLP-------PDE---YRP---WSLPFRY 403
                 ::.:|             :.|..|...::  .||       ||.   ||.   |....:.
 Worm   612 DFDDILDEMGINNGENQKRFHFERHITGPPSKMYQFQLPGATRGITPDGNCFYRAISWWITGVQS 676

  Fly   404 HRQMPRLPLPKYAGKANK--SSKWKKNKLFEMDQYFEH--------SKCDLMPYMPVDNCYQGVH 458
            |..:.|..:.|:. |.|:  ..|:..|:::|  :|.|:        :.|::.....:.|.....:
 Worm   677 HHMIFREAVGKHL-KKNELMFKKYCHNEIYE--KYVENAMRDGVWATTCEIFAMANMLNVEIITY 738

  Fly   459 IQDDEQRDHNDPEQN---------------DQNPTTEQRDREEPQAQKQHQRTKASRVQPQ 504
            :.|.....|: |:.|               ...|||..|.....::..:.:.|..|.:..:
 Worm   739 LGDSGWVPHS-PQNNYPPRKGAIYLKNTNMHYEPTTSLRKNSPERSPMKKENTNGSSMHDE 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otuNP_511089.2 OTU 37..>115 CDD:303090 17/81 (21%)
TUDOR 335..392 CDD:197660 13/91 (14%)
TAF12 <446..>564 CDD:304643 11/74 (15%)
duo-1NP_505931.3 Peptidase_C19Q 270..875 CDD:239138 109/615 (18%)
OTU 657..>743 CDD:303090 18/88 (20%)
Peptidase_C19 <750..861 CDD:271592 7/49 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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