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Protein Alignment CG32110 and Senp18

DIOPT Version :9

Sequence 1:	NP_729837.1	Gene:	CG32110 / 317858	FlyBaseID:	FBgn0052110	Length:	411	Species:	Drosophila melanogaster
Sequence 2:	NP_001002834.1	Gene:	Senp18 / 408222	RGDID:	1303230	Length:	475	Species:	Rattus norvegicus

Alignment Length:	455	Identity:	136/455 - (29%)
Similarity:	214/455 - (47%)	Gaps:	86/455 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 TKECQD-YPMAKTMPVLKQPENFQEQEEDVVMAVQEKLKFFRKLTSNGPAVPTPLK------VVE 76
            ::.||| ..|....|...:.:..||.::..:...|......:|....|.....||:      |||
  Rat    42 SRNCQDGAQMVFQKPGKARKKTHQEHQDQKLNKEQPGKGQGQKTQDEGSGNIKPLEGLPDQAVVE 106

  Fly    77 KEDIGHKEIPKVVKKVDRKTKLLQAIPAVFKHSHNRRFRRSLF-------LRSNYIEQFRRWTDQ 134
            |...|.|     .:|  |...:||..|   :...|.:..|||.       :||:.......::|.
  Rat   107 KSTEGGK-----CRK--RPYSVLQEKP---QSPQNEKHARSLEHLQGGHPVRSDPHRPHPTFSDT 161

  Fly   135 KNKL---------------NRKRLNEAHQLCLKAKHERIACE---------------------ID 163
            .|..               :|:...|.    |..|.|:...|                     :|
  Rat   162 SNNKGGMPGHPHGRETAHGDRQPSTEV----LSTKREKRCAEEKCVRGNSLEHGLPGTANANILD 222

  Fly   164 RYKKLILKQSVHVIEDIRISSELIPLTKEHHDRLMELSKY------------PLQQVIVAKFNLD 216
            .....:|...|.|     ::.|...|.::.:::..|.:|.            ..::::...|.|.
  Rat   223 SGGGRLLPDKVAV-----VAGEKNALPEQENNQEKEFTKEMEKEVEKALGPGAQEEILSTGFKLK 282

  Fly   217 ICGSDIKILTSGGWLNDKIINFYMNLLVERSEKRPGTVPSVYAMSTFFVPRLLQSGFDGVKRWTR 281
            |...|::.|.:|.||||::|||||||||:|:| .|| .|:::|.||||..:|...|::.||||||
  Rat   283 ITRGDMQTLKNGQWLNDEVINFYMNLLVQRNE-NPG-YPALHAFSTFFYAKLKHGGYNSVKRWTR 345

  Fly   282 KVDLFSMDLILVPVHQMLVHWCLVIIDLPAKTMLYYNSRGRGDPNLMRALVKYLQMESEDKLGLC 346
            .::||..:|||||:||. |||.||:|||..::::|.:|.|:...|:...:..|||.||:.:..:.
  Rat   346 GINLFEKELILVPIHQR-VHWSLVVIDLRKRSIVYLDSMGQTGKNICETIFHYLQNESKTRRNME 409

  Fly   347 LDTSEFRIED--AQNVPQQDNMNDCGVFVCMFAEYLTRDAPITFSKKDMKYFRTKMVLELTGDQL 409
            ||..|::...  :|.:|||.|.:|||:|.|.:|:|::||.|:|||::.|..||.:||.|:....|
  Rat   410 LDPVEWKQYSLTSQEIPQQLNGSDCGMFTCKYADYISRDQPVTFSQQHMPLFRKRMVWEILHSHL 474

Fly 410 409
Rat 475 474

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG32110	NP_729837.1	Peptidase_C48	230..400	CDD:397169	81/171 (47%)
Senp18	NP_001002834.1	Peptidase_C48	<244..470	CDD:420019	92/228 (40%)

Information from Original Tools:

Software error:

Can't use an undefined value as an ARRAY reference at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 1034.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-
Domainoid	1	1.000	-	-
eggNOG	1	0.900	-	-
Hieranoid	1	1.000	-	-