DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vha16-3 and AT2G16510

DIOPT Version :10

Sequence 1:NP_729706.1 Gene:Vha16-3 / 317846 FlyBaseID:FBgn0028667 Length:158 Species:Drosophila melanogaster
Sequence 2:NP_179244.1 Gene:AT2G16510 / 816150 AraportID:AT2G16510 Length:164 Species:Arabidopsis thaliana


Alignment Length:161 Identity:99/161 - (61%)
Similarity:128/161 - (79%) Gaps:7/161 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MATDAADKDKPAYSFFFGSMGAASAIIFSALGAAYGTAKSGTGIAAMAVMRPELIMKSIIPVVMA 65
            |:|.:.|:..|    |||.:|||:|::||.:||||||||||.|:|:|.||||||:||||:|||||
plant     1 MSTFSGDETAP----FFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

  Fly    66 GIIAIYGLVVSVLIAGSL---SDSYTIRKGYIHLAAGLSVGFAGLAAGFAIGIVGDAGVRGTAQQ 127
            |::.||||:::|:|:..:   :.||.:..||.||::||:.|.|||:||.|||||||||||..|||
plant    62 GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQ 126

  Fly   128 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 158
            |:|||||||||||||.|.||||||.|.|.::
plant   127 PKLFVGMILILIFAEALALYGLIVGIILSSR 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vha16-3NP_729706.1 V_ATP_synt_C 16..121 CDD:130170 66/107 (62%)
ATP-synt_Vo_c_ATP6C_rpt2 91..156 CDD:349416 48/64 (75%)
AT2G16510NP_179244.1 V_ATP_synt_C 12..120 CDD:130170 66/107 (62%)
ATP-synt_Vo_c_ATP6C_rpt2 88..155 CDD:349416 48/66 (73%)

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