Protein Alignment Vha16-3 and atp5mc3a

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_957470.1
• Gene: atp5mc3a / 394151
• ZFINID: ZDB-GENE-040426-857
• Length: 139
• Species: Danio rerio
• Alignment Length: 125
• Identity: 37/125 - (29%)
• Similarity: 55/125 - (44%)
• Gaps: 27/125 - (21%)

  Fly    44 IAAMAVMRPE--------LIMKSIIPVVMAGIIAIYGLVVSVLIAGSLSDSYTIRKGYIHLAAG- 99
            ::|..:.|||        .|::|  ||....:.:.....||       .|..|..|   .:.||
Zfish    25 VSAAVLSRPEAKPEVSTAAILQS--PVAQMALRSFQTSAVS-------RDIDTAAK---FIGAGA 77

  Fly   100 LSVGFAGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGLIVAIYL 155
            .:||.||..||  ||.|..:.:.|.|:.|    :||...||....:|.:||:.|:||..:
Zfish    78 ATVGVAGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLI 135

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	24/85 (28%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	25/70 (36%)
atp5mc3a	NP_957470.1	ATP9	65..139	CDD:164765	27/76 (36%)