Protein Alignment Vha16-3 and atp6v0ca

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_775362.2
• Gene: atp6v0ca / 192336
• ZFINID: ZDB-GENE-020419-23
• Length: 154
• Species: Danio rerio
• Alignment Length: 152
• Identity: 122/152 - (80%)
• Similarity: 135/152 - (88%)
• Gaps: 0/152 - (0%)

  Fly     7 DKDKPAYSFFFGSMGAASAIIFSALGAAYGTAKSGTGIAAMAVMRPELIMKSIIPVVMAGIIAIY 71
            |...|.||.||..|||:||::||||||||||||||||||||:|||||||||||||||||||||||
Zfish     2 DTQNPQYSPFFAVMGASSAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 66

  Fly    72 GLVVSVLIAGSLSDSYTIRKGYIHLAAGLSVGFAGLAAGFAIGIVGDAGVRGTAQQPRLFVGMIL 136
            ||||:||||.::.|..::.|.::||.||||||.:|||||||||||||||||||||||||||||||
Zfish    67 GLVVAVLIANNIGDKISLYKSFLHLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMIL 131

  Fly   137 ILIFAEVLGLYGLIVAIYLYTK 158
            ||||||||||||||||:.|.||
Zfish   132 ILIFAEVLGLYGLIVALILSTK 153

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	82/104 (79%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	56/64 (88%)
atp6v0ca	NP_775362.2	V_ATP_synt_C	11..116	CDD:130170	82/104 (79%)
		ATP-synt_Vo_c_ATP6C_rpt2	84..151	CDD:349416	56/66 (85%)