Protein Alignment Vha16-3 and vha-3

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_001367642.1
• Gene: vha-3 / 177018
• WormBaseID: WBGene00006912
• Length: 161
• Species: Caenorhabditis elegans
• Alignment Length: 160
• Identity: 110/160 - (68%)
• Similarity: 129/160 - (80%)
• Gaps: 3/160 - (1%)

  Fly     1 MATDAADKDKPAYSFFFGSMGAASAIIFSALGAAYGTAKSGTGIAAMAVMRPELIMKSIIPVVMA 65
            |:.|....::.||:.|||.||||||.||:.||||||||||..||.:|.||||||||||:|||:||
 Worm     1 MSYDLETAERAAYAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMA 65

  Fly    66 GIIAIYGLVVSVLIAG---SLSDSYTIRKGYIHLAAGLSVGFAGLAAGFAIGIVGDAGVRGTAQQ 127
            |||.||||||::::.|   |.|..|.:.||:.||||||:.|..||.||:||||||||||||||||
 Worm    66 GIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQ 130

  Fly   128 PRLFVGMILILIFAEVLGLYGLIVAIYLYT 157
            |||||||||||||:|||||||:|||:.|.|
 Worm   131 PRLFVGMILILIFSEVLGLYGMIVALILGT 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	73/107 (68%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	52/64 (81%)
vha-3	NP_001367642.1	V_ATP_synt_C	16..124	CDD:130170	73/107 (68%)
		ATP-synt_Vo_c_ATP6C_rpt2	92..158	CDD:349416	52/65 (80%)