Protein Alignment Vha16-3 and vha-1

DIOPT Version :10

• Sequence 1: NP_729706.1
• Gene: Vha16-3 / 317846
• FlyBaseID: FBgn0028667
• Length: 158
• Species: Drosophila melanogaster
• Sequence 2: NP_499165.1
• Gene: vha-1 / 176383
• WormBaseID: WBGene00006910
• Length: 169
• Species: Caenorhabditis elegans
• Alignment Length: 166
• Identity: 100/166 - (60%)
• Similarity: 125/166 - (75%)
• Gaps: 11/166 - (6%)

  Fly     1 MATDA----AD----KDKPAYSFFFGSMGAASAIIFSALGAAYGTAKSGTGIAAMAVMRPELIMK 57
            |:||.    ||    .::..|..||||:|..||:.|:|.|:||||||:|||||:|||.||:|:||
 Worm     1 MSTDTKQIIADALLKNEQAMYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMK 65

  Fly    58 SIIPVVMAGIIAIYGLVVSVLIAGSLSD---SYTIRKGYIHLAAGLSVGFAGLAAGFAIGIVGDA 119
            :|||||||||:|||||||:|:::|.:..   :|||...:...|.||..|..||.||:||||.|||
 Worm    66 AIIPVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDA 130

  Fly   120 GVRGTAQQPRLFVGMILILIFAEVLGLYGLIVAIYL 155
            |||..:||||:||||||||||||||||||:|||:.|
 Worm   131 GVRALSQQPRMFVGMILILIFAEVLGLYGMIVALIL 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Vha16-3	NP_729706.1	V_ATP_synt_C	16..121	CDD:130170	65/107 (61%)
		ATP-synt_Vo_c_ATP6C_rpt2	91..156	CDD:349416	44/65 (68%)
vha-1	NP_499165.1	PRK13469	24..132	CDD:469780	65/107 (61%)
		ATP-synt_Vo_c_ATP6C_rpt2	103..166	CDD:349416	43/62 (69%)