DRSC/TRiP Functional Genomics Resources

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Protein Alignment ghi and sptssb

DIOPT Version :10

Sequence 1:NP_729495.1 Gene:ghi / 317833 FlyBaseID:FBgn0266124 Length:81 Species:Drosophila melanogaster
Sequence 2:NP_001153305.1 Gene:sptssb / 678546 ZFINID:ZDB-GENE-060421-6887 Length:80 Species:Danio rerio


Alignment Length:48 Identity:12/48 - (25%)
Similarity:30/48 - (62%) Gaps:0/48 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LDNLVEFASYWWFRYLMVTELYMVEKWERITIHVIFMVLFCVFWYFNY 49
            :.|:.|:.|:.:::||::|.:|::|.||:...:.:...:..:..|.:|
Zfish     3 MKNMREYMSWLYYQYLLITGIYVLEPWEQSIFNTVLFTMVAMVIYTSY 50

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ghiNP_729495.1 None
sptssbNP_001153305.1 SPT_ssu-like 7..60 CDD:463347 11/44 (25%)

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