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Protein Alignment ghi and sptssb
DIOPT Version :10
| Sequence 1: | NP_729495.1 |
Gene: | ghi / 317833 |
FlyBaseID: | FBgn0266124 |
Length: | 81 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001153305.1 |
Gene: | sptssb / 678546 |
ZFINID: | ZDB-GENE-060421-6887 |
Length: | 80 |
Species: | Danio rerio |
| Alignment Length: | 48 |
Identity: | 12/48 - (25%) |
| Similarity: | 30/48 - (62%) |
Gaps: | 0/48 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 2 LDNLVEFASYWWFRYLMVTELYMVEKWERITIHVIFMVLFCVFWYFNY 49
:.|:.|:.|:.:::||::|.:|::|.||:...:.:...:..:..|.:|
Zfish 3 MKNMREYMSWLYYQYLLITGIYVLEPWEQSIFNTVLFTMVAMVIYTSY 50
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| ghi | NP_729495.1 |
None |
| sptssb | NP_001153305.1 |
SPT_ssu-like |
7..60 |
CDD:463347 |
11/44 (25%) |
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