DRSC/TRiP Functional Genomics Resources

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Protein Alignment ghi and SPTSSA

DIOPT Version :8

Sequence 1:NP_729495.1 Gene:ghi / 317833 FlyBaseID:FBgn0266124 Length:81 Species:Drosophila melanogaster
Sequence 2:NP_612145.2 Gene:SPTSSA / 171546 HGNCID:20361 Length:71 Species:Homo sapiens

Alignment Length:49 Identity:18/50 (36%)
Similarity:29/50 (58%) Gaps:15/50 (30%)


  Fly    10 SYWWFRYLMVTELYMVEKWERITIHVIFMVLFCVFWYFNYSVLLSLAGL 58
            |:::::||:||.|||:|.|||..              || |:|:|:.|:
Human    14 SWFYYQYLLVTALYMLEPWERTV--------------FN-SMLVSIVGM 47

Known Domains:


GeneSequenceDomainRegion External IDIdentity
ghiNP_729495.1 None
SPTSSANP_612145.2 SPT_ssu-like 10..59 CDD:314617 18/50 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1627882at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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