DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trxr1 and txnrd3

DIOPT Version :10

Sequence 1:NP_727251.1 Gene:Trxr1 / 31760 FlyBaseID:FBgn0020653 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_898895.2 Gene:txnrd3 / 352924 ZFINID:ZDB-GENE-030327-3 Length:602 Species:Danio rerio


Alignment Length:499 Identity:260/499 - (52%)
Similarity:335/499 - (67%) Gaps:8/499 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VRKMSTKGGS-YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVG 166
            ::|:..:|.. ||||||||||||.||||:|||...|.:|..||:|.|||. ||.||:||||||||
Zfish   103 LQKLLGEGSEVYDYDLIVIGGGSGGLACSKEAATLGKKVMVLDYVVPTPQ-GTAWGLGGTCVNVG 166

  Fly   167 CIPKKLMHQASLLGEAVHEAAAYGWNVDEKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYI 231
            |||||||||.:|||.|:.:|..:||...|::..:|..:..:|.|:|.|:||..||.||||.|.|:
Zfish   167 CIPKKLMHQTALLGTAMEDARKFGWEFAEQVTHNWETMKTAVNNYIGSLNWGYRVSLRDKNVNYV 231

  Fly   232 NGLGSFVDSHTLLAKLKSGERTI-TAQTFVIAVGGRPRYPDIPGAVEYGITSDDLFSLDREPGKT 295
            |....||:.|.:.|..|.|:.|. ||..||:|.|.||||..|||..|:.|||||||||...||||
Zfish   232 NAYAEFVEPHKIKATNKRGKETFYTAAQFVLATGERPRYLGIPGDKEFCITSDDLFSLPYCPGKT 296

  Fly   296 LVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEK 360
            |||||.|:.|||.|||.|||.:.|:|||||:||||||.||:.....||..|:.||||.||..:|:
Zfish   297 LVVGASYVALECGGFLAGLGLDVTIMVRSILLRGFDQDMADRAGEYMETHGVKFLRKFVPTKIEQ 361

  Fly   361 QD---DGKLLVKYKNVETGEEAEDVYDTVLWAIGRKGLVDDLNLPNAGVTV--QKDKIPVDSQEA 420
            .:   .|::.|..|:.|:.|..|..|:|||.|:||......:.|..|||.:  :..|:||:.:|.
Zfish   362 LEAGTPGRIKVTAKSTESEEVFEGEYNTVLIAVGRDACTGKIGLDKAGVKINEKNGKVPVNDEEQ 426

  Fly   421 TNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYGGSTQRMDYKDVATTVFTPLEYACVGLSEE 485
            |||.:|||:|||:.||.||||||:.||:|||||||.|:|.:.||.:|.||||||:||...|..||
Zfish   427 TNVPHIYAIGDILEGKWELTPVAIQAGKLLARRLYAGATMKCDYVNVPTTVFTPMEYGSCGHPEE 491

  Fly   486 DAVKQFGADEIEVFHGYYKPTEFFIPQKSVRYCYLKAVAERHGDQRVYGLHYIGPVAGEVIQGFA 550
            .|::.:|.:.:||:|..:.|.||.:|.:....||.|.:..:..:.||.|.||:||.||||.|||.
Zfish   492 KAIQMYGQENLEVYHSLFWPLEFTVPGRDNNKCYAKIICNKLDNLRVIGFHYLGPNAGEVTQGFG 556

  Fly   551 AALKSGLTINTLINTVGIHPTTAEEFTRLAITKRSGLDPTPASC 594
            ||:|.|:|.:.|.||:|||||.||.||.:.:||.||.|.|.:.|
Zfish   557 AAMKCGITKDQLDNTIGIHPTCAEIFTTMEVTKSSGGDITQSGC 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Trxr1NP_727251.1 DAO 59..>160 CDD:477422 33/57 (58%)
TGR 113..595 CDD:273624 258/488 (53%)
txnrd3NP_898895.2 GRX_GRXh_1_2_like 25..106 CDD:239511 0/2 (0%)
TGR 114..602 CDD:273624 258/488 (53%)

Return to query results.
Submit another query.