DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and Odj

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_650661.1 Gene:Odj / 42145 FlyBaseID:FBgn0038551 Length:430 Species:Drosophila melanogaster


Alignment Length:378 Identity:93/378 - (24%)
Similarity:136/378 - (35%) Gaps:104/378 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 QDVVEVQGNEELHEELAKEA------SPDLEEEEEEKEEGSKRQHYQRAAAMKNTLVETREDLLD 132
            |..:|...|  ||:.::.:|      ||::                  :..:.:.|:  :.::||
  Fly    66 QRCLETHAN--LHQRISSKAGVASKGSPEV------------------SPVLSDPLL--KREVLD 108

  Fly   133 IELDWTGGEQSEHNETHEEEEGESDDDDTKDSNDTKDMLFQCDQCDRAYNTKR---------SLQ 188
            ..:|           |.:::|...||.|..|  |.||.|.......|....|:         :.|
  Fly   109 DTVD-----------TEDDKELLDDDKDLMD--DDKDFLEDEKPILRYPPAKKIRIEDQNFPNRQ 160

  Fly   189 SHR-RLKH------SEANGGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWKH 246
            |.| |:|.      .:|:..........|..:||:..|||              :|.::.:    
  Fly   161 SPRVRVKRLRVPVVEKADSPPPPPREHVRKPRKRRPKPKV--------------DRSIKRY---- 207

  Fly   247 TGIFCDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSH-SICHTGRMPCICEVC 310
               .||.||..|....||..|:.||...| ..|.||...|||...|..| .:.|.|..|.:|:.|
  Fly   208 ---VCDQCGWSFNDHSNMKDHKLRHFEEK-FSCDECGRKFYTMPLLRLHIRVHHKGEKPYVCKFC 268

  Fly   311 G-----RPCRDRGVLTAHMRR-HTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRP--FVCDVCG 367
            |     .|.|.|     |.|: |..|....|::|||.|.|......|...|.:.:|  .:|..|.
  Fly   269 GMGFANSPSRCR-----HERQMHANELVHPCKICGKRFNSEKGRLKHEEGHKSDQPDVHICLTCN 328

  Fly   368 STFQRKKALRVHKLLHSEQRKYACKLCGK--TFAQSGGLNAHMRSHDPARVKG 418
            ..|  |:|..:|       |.|:.|...|  ....:|.........|||...|
  Fly   329 KEF--KEAQFLH-------RHYSTKYHRKRVNLLVNGPKEEFQSEVDPAEFPG 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 26/96 (27%)
C2H2 Zn finger 224..246 CDD:275368 1/21 (5%)
C2H2 Zn finger 251..271 CDD:275368 8/19 (42%)
zf-H2C2_2 263..288 CDD:463886 10/24 (42%)
C2H2 Zn finger 279..327 CDD:275368 19/54 (35%)
zf-H2C2_2 320..342 CDD:463886 8/22 (36%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 6/19 (32%)
zf-C2H2 389..411 CDD:395048 4/23 (17%)
C2H2 Zn finger 391..411 CDD:275368 3/21 (14%)
OdjNP_650661.1 zf-AD 5..78 CDD:462262 5/13 (38%)
C2H2 Zn finger 209..229 CDD:275368 8/19 (42%)
SUF4-like 212..>257 CDD:411020 17/45 (38%)
C2H2 Zn finger 212..229 CDD:411020 6/16 (38%)
C2H2 Zn finger 236..256 CDD:411020 8/19 (42%)
C2H2 Zn finger 236..256 CDD:275368 8/19 (42%)
zf-H2C2_2 249..274 CDD:463886 8/24 (33%)
C2H2 Zn finger 265..283 CDD:275368 7/22 (32%)
C2H2 Zn finger 298..314 CDD:275368 5/15 (33%)
zf-C2H2_jaz 322..347 CDD:432381 9/33 (27%)
C2H2 Zn finger 324..343 CDD:275368 8/27 (30%)

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