DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and CG17328

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_609786.2 Gene:CG17328 / 34962 FlyBaseID:FBgn0028895 Length:413 Species:Drosophila melanogaster


Alignment Length:311 Identity:83/311 - (26%)
Similarity:123/311 - (39%) Gaps:65/311 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 DRAYNT---KRSLQSHRRLKHSEANGGSLDKSASERNSKKRKGPPKVYKCNEEACNQTFRTERDL 239
            |.|.||   ::.|...|.....|    .:|...|:|.|:.::.||:.:|               .
  Fly    91 DAATNTDFVEKPLLPQRDSDEEE----PVDAKVSKRRSRYQRKPPEEHK---------------K 136

  Fly   240 RG----HRWKHTGIFCDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHT 300
            ||    .:..||   |..|.|.|.....:.:|.:.|:|.||::|..|...|..:..|..|...||
  Fly   137 RGPKPVPKMPHT---CYECHKSFKCIAQLTQHIRTHTGEKPYQCSFCIQRFAQKYNLKVHERTHT 198

  Fly   301 GRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDV 365
            |..|..||:|.:.....|...||.:.|.|.|...|.:|.|.||:..||:.|.::||.::...|||
  Fly   199 GDKPFQCEICSKQFSALGNFQAHQKIHLGVRDQVCSLCQKGFYTAGDLSKHMITHTGIKNHHCDV 263

  Fly   366 CGSTFQRKKALRVHKL-LHS----------------------------EQRKYACKLCGKTFAQS 401
            ||..|.|::.:|.||| ||.                            :...:.|..|.|.|..:
  Fly   264 CGKAFSRRRDMRTHKLKLHPLESSTNHDIVDDDDDEAIDTDPVGLDTLDHAHFKCPDCDKAFDTA 328

  Fly   402 GGLNAHMRSHDPARVKGAVKPLPQSVTI------EVIEGKSPPTTTITMAI 446
            ..|:.|.|:| .|.......|||.:..:      :.:....||.....|.:
  Fly   329 DSLSLHFRTH-AANNNLLNLPLPPAPPMSHHYHHDALHHLGPPNPATQMGM 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 26/94 (28%)
C2H2 Zn finger 224..246 CDD:275368 2/25 (8%)
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
zf-H2C2_2 263..288 CDD:463886 8/24 (33%)
C2H2 Zn finger 279..327 CDD:275368 15/47 (32%)
zf-H2C2_2 320..342 CDD:463886 8/21 (38%)
C2H2 Zn finger 335..355 CDD:275368 8/19 (42%)
C2H2 Zn finger 363..383 CDD:275368 11/20 (55%)
zf-C2H2 389..411 CDD:395048 7/21 (33%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
CG17328NP_609786.2 zf-AD 8..80 CDD:214871
COG5048 146..>211 CDD:227381 23/67 (34%)
C2H2 Zn finger 149..169 CDD:275368 5/19 (26%)
C2H2 Zn finger 177..197 CDD:275368 5/19 (26%)
zf-H2C2_2 189..213 CDD:463886 9/23 (39%)
C2H2 Zn finger 205..225 CDD:275368 6/19 (32%)
C2H2 Zn finger 233..253 CDD:275368 8/19 (42%)
zf-H2C2_2 245..270 CDD:463886 11/24 (46%)
C2H2 Zn finger 261..282 CDD:275368 11/20 (55%)
C2H2 Zn finger 318..338 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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