DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and crol

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:255 Identity:82/255 - (32%)
Similarity:119/255 - (46%) Gaps:23/255 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 FQCDQCDRAYNTKRSLQSHRRLK------------HSEANGGSLDKSASERNSKKRKGPPKVYKC 224
            |.|..|.:.:.|.:.|..|.::.            :..||..||::      ..||....|.:.|
  Fly   249 FMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLER------HMKRHSTDKPFAC 307

  Fly   225 NEEACNQTFRTERDLRGHRWKHTG---IFCDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATF 286
            .  .|.:||..:..|..|...|||   ..|..|.|.||:..:|:.|.::|:|..||:|..|..:|
  Fly   308 T--ICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSF 370

  Fly   287 YTQKELSSHSICHTGRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVH 351
            ..::...:|.:.|||:.|..|:|||:....:..|..|||.||.|.|.:||:|||:|........|
  Fly   371 TRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNH 435

  Fly   352 AVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTFAQSGGLNAHMRSH 411
            .:.||...|..||.|..||.||:.|..|...|:.:..:.|..|.|||.:...|..|:|.|
  Fly   436 ILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQH 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 32/93 (34%)
C2H2 Zn finger 224..246 CDD:275368 6/21 (29%)
C2H2 Zn finger 251..271 CDD:275368 7/19 (37%)
zf-H2C2_2 263..288 CDD:463886 9/24 (38%)
C2H2 Zn finger 279..327 CDD:275368 16/47 (34%)
zf-H2C2_2 320..342 CDD:463886 13/21 (62%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 9/19 (47%)
zf-C2H2 389..411 CDD:395048 8/21 (38%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..299 CDD:275368 5/25 (20%)
COG5048 300..723 CDD:227381 70/198 (35%)
C2H2 Zn finger 307..327 CDD:275368 6/21 (29%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 4/19 (21%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368
C2H2 Zn finger 531..551 CDD:275368
C2H2 Zn finger 559..579 CDD:275368
C2H2 Zn finger 587..607 CDD:275368
C2H2 Zn finger 615..636 CDD:275368
C2H2 Zn finger 644..664 CDD:275368
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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