DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18262 and CG11398

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_569896.1 Gene:CG11398 / 31070 FlyBaseID:FBgn0040366 Length:329 Species:Drosophila melanogaster


Alignment Length:271 Identity:69/271 - (25%)
Similarity:111/271 - (40%) Gaps:43/271 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 SERNSKKRKGPPKVYKCNEEACNQTFRTERDLRGHRWKH----------TGIFCDICGKPFTQSG 262
            :||:..::.|.|. :.|..  |...|.|..:|..||..|          :...||.||:.|.:..
  Fly    37 NERSQHQQGGSPS-FVCRR--CPALFLTREELAAHRPTHRYQGGQQTPASEHACDACGRVFQKHN 98

  Fly   263 NMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRM-------PCICEVCGRPCRDRGVL 320
            .::.|...|:.::.:.||||.|.|..:    |:..||...:       .|....|.:..:.|...
  Fly    99 ALVDHMNAHNDVRNYPCPECPARFVQR----SNRECHLKNVHRKVYLHSCPEPGCKKRFQQRREC 159

  Fly   321 TAHMRR-HTGERPAKCEVCGKAFYSFHDLNV--HAVSHTNLRPFVCDVCGSTFQRKKALRVHKLL 382
            ..|::. |..||...|:.|...|  .|.:|.  |..||.:.:.:.|.:||..|.|.:...||..:
  Fly   160 DQHVKTVHQNERNLVCDTCSARF--SHPVNYRKHLASHGSAKSYGCPICGKLFGRPENRDVHLFV 222

  Fly   383 HSEQRKYACKLCGKTFAQSGGLNAH----MRSHDPARVKGAVKPLPQSVTIEVIEGKSPPTTTIT 443
            ||..:.|.|.:||..:.:...|..|    ...:||     .|:..||.......:.:|..:    
  Fly   223 HSICKAYICSVCGADYMRRNQLIRHGLASGHHNDP-----IVRQKPQFSPALAAKNRSQRS---- 278

  Fly   444 MAIDLNVEEQL 454
             |||.:.:|:|
  Fly   279 -AIDESQDEEL 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 26/107 (24%)
C2H2 Zn finger 224..246 CDD:275368 7/21 (33%)
C2H2 Zn finger 251..271 CDD:275368 6/19 (32%)
zf-H2C2_2 263..288 CDD:463886 8/24 (33%)
C2H2 Zn finger 279..327 CDD:275368 13/55 (24%)
zf-H2C2_2 320..342 CDD:463886 6/22 (27%)
C2H2 Zn finger 335..355 CDD:275368 6/21 (29%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
zf-C2H2 389..411 CDD:395048 6/25 (24%)
C2H2 Zn finger 391..411 CDD:275368 5/23 (22%)
CG11398NP_569896.1 C2H2 Zn finger 52..72 CDD:275368 7/21 (33%)
C2H2 Zn finger 87..107 CDD:275368 6/19 (32%)
C2H2 Zn finger 115..136 CDD:275368 9/24 (38%)
C2H2 Zn finger 144..165 CDD:275368 4/20 (20%)
C2H2 Zn finger 175..195 CDD:275368 6/21 (29%)
C2H2 Zn finger 203..223 CDD:275368 7/19 (37%)
C2H2 Zn finger 231..247 CDD:275368 4/15 (27%)

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