Protein Alignment CG18262 and lsl-1

DIOPT Version :10

• Sequence 1: NP_572453.1
• Gene: CG18262 / 31745
• FlyBaseID: FBgn0030012
• Length: 469
• Species: Drosophila melanogaster
• Sequence 2: NP_492621.2
• Gene: lsl-1 / 172844
• WormBaseID: WBGene00009937
• Length: 318
• Species: Caenorhabditis elegans
• Alignment Length: 117
• Identity: 39/117 - (33%)
• Similarity: 60/117 - (51%)
• Gaps: 14/117 - (11%)

  Fly   334 KCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQRKYACKLCGKTF 398
            :|.||.|.|.::..|..|:|.||:.:|::|||||..|:.|..:..|:.:|:....|.|..|||.|
 Worm    38 QCNVCNKMFMNYKGLQQHSVIHTDTKPYICDVCGRGFRYKSNMFEHRTVHTGYTPYVCPFCGKQF 102

  Fly   399 AQSGGLNAHMRSHDPAR--VKGAVKP----------LPQSVTIEVIEGKSPP 438
            ...|.:..|||:|..::  ::.|.:|          :|....  ||.|.|.|
 Worm   103 RLKGNMKKHMRTHVTSKEELEAAYRPYSSNRRSSGIIPSDAL--VIRGTSMP 152

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG18262	NP_572453.1	COG5236	<222..>313	CDD:227561
		C2H2 Zn finger	224..246	CDD:275368
		C2H2 Zn finger	251..271	CDD:275368
		zf-H2C2_2	263..288	CDD:463886
		C2H2 Zn finger	279..327	CDD:275368
		zf-H2C2_2	320..342	CDD:463886	4/7 (57%)
		C2H2 Zn finger	335..355	CDD:275368	8/19 (42%)
		C2H2 Zn finger	363..383	CDD:275368	8/19 (42%)
		zf-C2H2	389..411	CDD:395048	10/21 (48%)
		C2H2 Zn finger	391..411	CDD:275368	9/19 (47%)
lsl-1	NP_492621.2	COG5048	<26..160	CDD:227381	39/117 (33%)
		C2H2 Zn finger	39..59	CDD:275368	8/19 (42%)
		C2H2 Zn finger	67..87	CDD:275368	8/19 (42%)
		zf-C2H2	93..115	CDD:395048	10/21 (48%)
		C2H2 Zn finger	95..115	CDD:275368	9/19 (47%)