DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18262 and znf276

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_002933710.1 Gene:znf276 / 100486887 XenbaseID:XB-GENE-983669 Length:570 Species:Xenopus tropicalis


Alignment Length:525 Identity:114/525 - (21%)
Similarity:172/525 - (32%) Gaps:195/525 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CGEVLFSAPASYEVSCLLCDQRLPLDGYPEHFRLKHFTNSSSSLCSNELESDPIAQDVVEVQ--- 80
            |.:::.|.|     .||              ..|.::|:..:..||    ..||.|.|:..|   
 Frog   159 CADLITSTP-----ECL--------------HSLVNWTHKHAGGCS----FLPILQRVMATQYCG 200

  Fly    81 ---------GNEELHEELAKE-----ASPDLEEEEEEKEEGSKRQHYQRAAAMKNT--------- 122
                     |.   |:.:.:.     :||...|||...|:|.......|.    ||         
 Frog   201 IIQAVWECGGG---HDYIMQPDSDCISSPAQPEEEMSPEQGLSGNGIHRI----NTRTIPDSEYN 258

  Fly   123 ---LVETREDLLD-------IELDWT-----GGEQSEHNETHEEEEGESDDDDTKDSNDTKDMLF 172
               .:.|...|||       |..:.|     ....|...:........|:|...:|.:|..|..|
 Frog   259 PPDRINTASVLLDTCVVVNHITQNRTPSPPLAAPDSSQGQDCRNSTLASNDHSKEDCSDLSDGDF 323

  Fly   173 QCDQ---------CDRAYN---TKRSLQSHRRLKHSEANGGSLDKSASERNSKKRKGP------- 218
            |..:         .|.::.   .||:.|..|..:.|:        ..:|...||:.||       
 Frog   324 QSQEEGEPGQQPSSDDSFEPCIAKRNPQKKREPRKSQ--------KLTEFREKKKPGPKPGWKKI 380

  Fly   219 -------PKVYKCNEEACNQTFRTERDLRGHRWKHTGIFCDICGKPFTQSGNMMRHRQRHSGIKP 276
                   |.:|||..:.|...:|....::.|..:|                        |..::.
 Frog   381 KREREELPTIYKCPYQGCTAVYRGADGMKKHIKEH------------------------HEEVRE 421

  Fly   277 HKCPE--CDATFYTQKELSSH-SICHTGRMPCICEVCGRPCRDRGVLTAHMRRHTGERPAKCEVC 338
            ..||.  |:..|...:.|..| .:.||.....||:.||:..:.|..|:.|..||:|.:|.:||||
 Frog   422 RPCPHPGCNKVFMIDRYLQRHVKLIHTEERNHICDQCGQAFKQRKHLSVHQMRHSGAKPLQCEVC 486

  Fly   339 GKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHKLLHSEQR--KYACKLCGKTFAQS 401
            |                     |.|       :::.:|:.|...|..:.  ::||..|.|.|.::
 Frog   487 G---------------------FQC-------RQRASLKYHMTKHKAEADLEFACDQCAKRFEKA 523

  Fly   402 GGLNAHMRSHDPARVKGAVKPLPQSVTIEVIEGKSPPT-------TTITMAIDLNVEEQLVKQ-- 457
            ..||.||         ..|.||.||      ..|.|.|       ||         |||::|.  
 Frog   524 HNLNVHM---------SMVHPLTQS------PAKQPETEPDAHSGTT---------EEQVLKPEL 564

  Fly   458 TETAP 462
            |:..|
 Frog   565 TQQLP 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 20/93 (22%)
C2H2 Zn finger 224..246 CDD:275368 4/21 (19%)
C2H2 Zn finger 251..271 CDD:275368 0/19 (0%)
zf-H2C2_2 263..288 CDD:463886 5/26 (19%)
C2H2 Zn finger 279..327 CDD:275368 15/50 (30%)
zf-H2C2_2 320..342 CDD:463886 11/21 (52%)
C2H2 Zn finger 335..355 CDD:275368 5/19 (26%)
C2H2 Zn finger 363..383 CDD:275368 3/19 (16%)
zf-C2H2 389..411 CDD:395048 9/21 (43%)
C2H2 Zn finger 391..411 CDD:275368 8/19 (42%)
znf276XP_002933710.1 SFP1 <320..476 CDD:227516 39/187 (21%)
C2H2 Zn finger 427..447 CDD:275368 4/19 (21%)
C2H2 Zn finger 455..475 CDD:275368 6/19 (32%)
C2H2 Zn finger 483..503 CDD:275368 9/47 (19%)
C2H2 Zn finger 513..530 CDD:275368 6/16 (38%)

Return to query results.
Submit another query.