DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18262 and si:ch211-161m3.6

DIOPT Version :10

Sequence 1:NP_572453.1 Gene:CG18262 / 31745 FlyBaseID:FBgn0030012 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001314790.1 Gene:si:ch211-161m3.6 / 100005838 ZFINID:ZDB-GENE-161017-36 Length:295 Species:Danio rerio


Alignment Length:290 Identity:88/290 - (30%)
Similarity:132/290 - (45%) Gaps:36/290 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 EDLLDIELDWTGGEQSEHNETHEEEEGESDDDDTKDSNDTKDMLFQCDQCDRAYNTKRSLQSHRR 192
            ||:..::::    :..||.:....:|...:.|:.::....::                       
Zfish    14 EDVFIVKME----DAEEHTDPLPVKEESQELDEVEEKGPFEN----------------------- 51

  Fly   193 LKHSEANGGSLDKSASERNSKKRK----GPPKVYKCNEEACNQTFRTERDLRGHRWKHTG---IF 250
            .:|....|.|..::.::|.|.:.|    .|...:.|.:  |.:.|..:..|..|...|||   ..
Zfish    52 YQHFVTGGQSFHRARTDRTSSQEKVQEIDPISYFICFQ--CGKGFTQKGSLNRHMRTHTGEKPYS 114

  Fly   251 CDICGKPFTQSGNMMRHRQRHSGIKPHKCPECDATFYTQKELSSHSICHTGRMPCICEVCGRPCR 315
            |.:|||.|.|.||:..|...|||..|..|.:|..:|..:..|..|...|||..|..|:.||....
Zfish   115 CPLCGKSFNQHGNLEVHMGVHSGETPFACQQCGKSFSRKGNLRYHMRVHTGECPFTCQQCGISFT 179

  Fly   316 DRGVLTAHMRRHTGERPAKCEVCGKAFYSFHDLNVHAVSHTNLRPFVCDVCGSTFQRKKALRVHK 380
            .:|.||.|||.||||||..|..||::|.....|.||..:||..:|:.|..||.:|.:...|:||.
Zfish   180 AKGSLTRHMRIHTGERPYTCSECGESFEQHGSLKVHMRTHTGEKPYTCQQCGKSFDQHGNLKVHL 244

  Fly   381 LLHSEQRKYACKLCGKTFAQSGGLNAHMRS 410
            .:|:.::.|.|..|.|||.|.|.|:||..|
Zfish   245 RIHTGEKPYECPQCAKTFDQHGNLSAHENS 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18262NP_572453.1 COG5236 <222..>313 CDD:227561 33/93 (35%)
C2H2 Zn finger 224..246 CDD:275368 5/21 (24%)
C2H2 Zn finger 251..271 CDD:275368 9/19 (47%)
zf-H2C2_2 263..288 CDD:463886 9/24 (38%)
C2H2 Zn finger 279..327 CDD:275368 18/47 (38%)
zf-H2C2_2 320..342 CDD:463886 14/21 (67%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 7/19 (37%)
zf-C2H2 389..411 CDD:395048 12/22 (55%)
C2H2 Zn finger 391..411 CDD:275368 11/20 (55%)
si:ch211-161m3.6NP_001314790.1 COG5048 <65..234 CDD:227381 62/170 (36%)
C2H2 Zn finger 87..107 CDD:275368 5/21 (24%)
C2H2 Zn finger 115..135 CDD:275368 9/19 (47%)
C2H2 Zn finger 143..163 CDD:275368 5/19 (26%)
C2H2 Zn finger 171..191 CDD:275368 9/19 (47%)
C2H2 Zn finger 199..219 CDD:275368 7/19 (37%)
C2H2 Zn finger 227..247 CDD:275368 7/19 (37%)
zf-H2C2_2 239..264 CDD:463886 10/24 (42%)
C2H2 Zn finger 255..271 CDD:275368 8/15 (53%)

Return to query results.
Submit another query.