DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2256 and hpcal1

DIOPT Version :8

Sequence 1:NP_572437.2 Gene:CG2256 / 31727 FlyBaseID:FBgn0029995 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001037893.1 Gene:hpcal1 / 733484 XenbaseID:XB-GENE-947040 Length:193 Species:Xenopus tropicalis

Alignment Length:220 Identity:54/221 (24%)
Similarity:103/221 (47%) Gaps:35/221 (16%)


  Fly   101 MDELSGKVNPKLLDSLRKKTRFTKDELDALCRIYRKLVSNCQYAAKTLASSSSSAAIAKPHAAVE 165
            |.:.:.|:.|::|..||:.|.||..||.   ..|:..:.:|...                |..||
 Frog     1 MGKQNSKLRPEVLQDLRENTEFTDHELQ---EWYKGFLKDCPTG----------------HLTVE 46

  Fly   166 GIDRIVFRELLHSTFDIVTEEILMERIFCSWDKAHEGLPLRLEGWLIGLSTFLRGTPAERAAFCF 230
                 .|:::..:.|.........|.:|.::|...:| .:....::|.||...||...::..:.|
 Frog    47 -----EFKKIYANFFPYGDASKFAEHVFRTFDTNGDG-TIDFREFIIALSVTSRGKLEQKLKWAF 105

  Fly   231 RVYDLNTDGFITKDEMFTLLR------NCLIKQPQDEDPDEGVKDLVEIVLKKFDLDKDGKVSLE 289
            .:|||:.:|:|::.||..:::      :.::|.|:||...|...|.   :.|:.|.:.|||:|||
 Frog   106 SMYDLDGNGYISRGEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDK---IFKQMDTNNDGKLSLE 167

  Fly   290 DFMGTVTAEPLLIEAFGQCLPTDSA 314
            :|:....::|.::... ||.|:.::
 Frog   168 EFIKGAKSDPSIVRLL-QCDPSSTS 191

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG2256NP_572437.2 EFh 228..292 CDD:238008 23/70 (33%)
EF-hand_7 229..292 CDD:290234 23/69 (33%)
hpcal1NP_001037893.1 FRQ1 13..179 CDD:227455 48/194 (25%)
EF-hand_8 39..86 CDD:290545 9/69 (13%)
EFh 65..126 CDD:238008 17/62 (27%)
EFh 100..174 CDD:238008 23/77 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0044
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.