DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1571 and dic1

DIOPT Version :10

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001342791.1 Gene:dic1 / 5802757 PomBaseID:SPBC646.17C Length:544 Species:Schizosaccharomyces pombe


Alignment Length:564 Identity:113/564 - (20%)
Similarity:201/564 - (35%) Gaps:157/564 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 EKSTQLSRQMALTVMETENVTLDQHGMYHYEGGWPKEVNFNDEEQTQRHRKKVEREDSWGEQVLS 112
            ::..::.|...|.:...||.| |.....:.||  ||:::   |:|......|:.:..:...|   
pombe     6 KREIEIKRAKLLLLKNKENCT-DAVSSSNKEG--PKQIS---EDQLSNFLCKILKPTNLTPQ--- 61

  Fly   113 MIRTTMSVAEQNNTL---------NIYQNF-----FADLPPELGHDIKMRFRARVANVFHDLWLP 163
                |.|:..:::.|         ::||::     .::..|.:...:.:|..::  ::.|....|
pombe    62 ----TYSLESKSSNLVSDCELKISSVYQSYSSTFNVSNHVPSISKTVNIRETSK--HLKHSTKAP 120

  Fly   164 ARQLRS----IEWMPN---------------NSRQFMTQYT-----------------NH----- 187
            ...|.:    |:.:.|               .|.|..|.||                 ||     
pombe   121 KCSLPTSALEIDHLNNFLHSSAKILDRALCDQSNQLFTDYTVKKKSKKNKSQLEENGLNHLFTFQ 185

  Fly   188 --------------------------FAK-GERLRPVTDEPFGGTNGF-YVWDVKNPLKPRITYD 224
                                      :|| .|.||         |.|. .||:.:....|.....
pombe   186 DEKITLNSVVNSISYSSFFEELLITSYAKPKEALR---------TRGLAIVWNQRWKNSPESVLK 241

  Fly   225 SKQQVSLAKICPKDENNMVGGTGLGQVCLWGTFKGGLPIR-NCPLEVSHRETTSALCWVHSKSNT 288
            ::.::::.|..|.....:.||...|||.||...:|..|:. ...:...|.|..:.:.::::..:.
pombe   242 ARSEITVCKPSPFHPQLIAGGAYNGQVFLWDLRQGQYPVSFTTIISGGHLEPVTDITYINNPPSN 306

  Fly   289 EFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQSRMDSHG----VTVLEFEYTIP---VRFI 346
            ...:.|.||.:..|:......|.:.:.|       .|::||..    .|.|.|   ||   :.|:
pombe   307 NIVTCSTDGLVHIWEPDMFSRPSETICL-------SSQVDSSSQCIPATCLSF---IPENNMEFL 361

  Fly   347 IGSDMGHVFVGNR------KGMTPMETLLAHYQLFVGPV---RSINRNPFFVKN--FLVTG--DW 398
            :|::.|.:..|.|      |.:.|.......:.:|:..:   .|.::|.|..||  |.:|.  ||
pombe   362 VGAEDGKLQRGYRSDYSETKAVQPSNVSYEGHNVFISGIDVMTSNSQNVFLEKNKDFALTSSFDW 426

  Fly   399 RARIW-------------SEEVKDS---PSTMYFRKNAQILCGAWSTGRCSLFVTGDINGVVDFW 447
            ..|:|             |.::.:.   .|...|...|.:....|.......|.:.|..|.::.|
pombe   427 TVRLWQCSPSRNQHELVPSNDLDEQVIINSCKTFTHKAMVFDVKWCVSEPCCFASVDALGNLNLW 491

  Fly   448 DLLLHHRKPIRS--VDFKVAIADLVFRPEGDLLAIGLKNGDTHI 489
            ||......|:.|  .|.| .:..:.::||...||.|..||:.||
pombe   492 DLQKDVEAPVTSDIPDGK-PLNKIAWQPEKRNLACGGLNGNVHI 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:475233 62/290 (21%)
WD40 repeat 229..269 CDD:293791 11/40 (28%)
WD40 repeat 277..325 CDD:293791 6/47 (13%)
WD40 repeat 332..369 CDD:293791 12/45 (27%)
WD40 repeat 379..415 CDD:293791 13/58 (22%)
WD40 repeat 422..447 CDD:293791 4/24 (17%)
dic1NP_001342791.1 WD40 243..536 CDD:475233 70/303 (23%)
WD40 repeat 247..289 CDD:293791 11/41 (27%)
WD40 repeat 294..339 CDD:293791 7/51 (14%)
WD40 repeat 348..390 CDD:293791 12/44 (27%)
WD40 repeat 397..453 CDD:293791 12/55 (22%)
WD40 repeat 466..504 CDD:293791 8/37 (22%)
WD40 repeat 511..535 CDD:293791 9/24 (38%)

Return to query results.
Submit another query.