DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and dnai4

DIOPT Version :10

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001018595.1 Gene:dnai4 / 553797 ZFINID:ZDB-GENE-050522-322 Length:778 Species:Danio rerio


Alignment Length:498 Identity:103/498 - (20%)
Similarity:167/498 - (33%) Gaps:118/498 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 EVNFNDEEQTQRHRKKVEREDSWG--------EQVLSMIRTTMSVAEQNNTLNIYQNFFADLP-- 138
            :|:.|....::||...:......|        .|.||::.|..:|:..:..:   :.....||  
Zfish   284 DVSANTVVSSERHEATIPESSPEGHLVHPKRSNQSLSVVSTVSTVSGSSTHI---EKMACVLPLD 345

  Fly   139 -----------PELGHDIKMRFRARVANVFHDLWLPARQLRSIE-----WMPNNSRQFMTQYTN- 186
                       .:|..|:.:..|..:||||.......|||..||     .|......:..|..| 
Zfish   346 EEPDLQLILQSDKLKQDLALMERVVLANVFQPKLAAYRQLPIIEDPDCVQMVMEEESWTEQSKNS 410

  Fly   187 HFAKGERLRPVTDEPFGGTN-GFYVWDVKNPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQ 250
            |....|||...:.|...|.| ...||:.|||....:.|.   ||..     |:.|:       |.
Zfish   411 HCPFLERLWDFSCELTMGRNVTCMVWNKKNPDLLAVGYG---QVEF-----KNPNS-------GL 460

  Fly   251 VCLW---------------------------------GTFKGGLPIRN------CPLEVS----- 271
            ||.|                                 |.:.|.:.|.|      .|:..|     
Zfish   461 VCCWSLKNPTWPDRVFYCESGVTALDFSASNANQLAVGMYDGTIAIYNVQTSEQTPITDSSDCAN 525

  Fly   272 -HRETTSALCWVHSKSNTEFYSG------SLDGSIKYW------DTRDL-KMPMQELLLEPEPQE 322
             |......|.|:..:.......|      |.||.|..|      :..|| |:.:.:|      |.
Zfish   526 LHTSPVWQLTWIDHEDGLAADKGEILVSVSSDGRISKWIHYKSMECVDLMKLKIHDL------QW 584

  Fly   323 RQSRMDSHGVTVLEFEYTIPVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVRSINRNPF 387
            :|...........:|.......:::|::.||:   ::...:..|..|..|:....||..:..:||
Zfish   585 KQHISSLTPGMCFDFHPNDSKIYLVGTEEGHI---HKCSSSYNEQYLDSYKAHKRPVYKVTWSPF 646

  Fly   388 FVKNFL-VTGDWRARIWSEEVKDSPSTMYFRKNAQILCGAWSTGRCSLFVTGDINGVVDFWDLLL 451
            ....|| .:.||..::|.::::  ...|.|....:::.....:..|:........|.|:.|||.:
Zfish   647 CSDVFLSCSSDWTIQLWRQDLQ--IPVMGFTSGQRVVFDIMWSPHCATVFGAVSEGKVEIWDLRV 709

  Fly   452 HHRKP--IRSVDFKVAIADLVFRPEGDLLAIGLKNGDTHIMTL 492
            ....|  :......|....|:|.||.|.:.:|...|...:..|
Zfish   710 SSLDPTLVNWTSPGVNPTALLFSPETDCVLVGDSEGQVTVYKL 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:475233 60/312 (19%)
WD40 repeat 229..269 CDD:293791 12/78 (15%)
WD40 repeat 277..325 CDD:293791 13/60 (22%)
WD40 repeat 332..369 CDD:293791 5/36 (14%)
WD40 repeat 379..415 CDD:293791 8/36 (22%)
WD40 repeat 422..447 CDD:293791 3/24 (13%)
dnai4NP_001018595.1 WD40 repeat 431..473 CDD:293791 14/56 (25%)
WD 1. /evidence=ECO:0000255 477..517 4/39 (10%)
WD40 479..751 CDD:475233 54/282 (19%)
WD40 repeat 483..526 CDD:293791 6/42 (14%)
WD 2. /evidence=ECO:0000255 526..573 9/46 (20%)
WD40 repeat 531..576 CDD:293791 10/44 (23%)
WD 3. /evidence=ECO:0000255 586..629 6/45 (13%)
WD40 repeat 589..624 CDD:293791 4/37 (11%)
WD 4. /evidence=ECO:0000255 633..673 9/41 (22%)
WD40 repeat 638..675 CDD:293791 9/38 (24%)
WD 5. /evidence=ECO:0000255 676..715 6/38 (16%)
WD40 repeat 681..707 CDD:293791 4/25 (16%)
WD 6. /evidence=ECO:0000255 721..760 9/32 (28%)

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