DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and Dnai1

DIOPT Version :10

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001019513.1 Gene:Dnai1 / 500442 RGDID:1565671 Length:705 Species:Rattus norvegicus


Alignment Length:587 Identity:112/587 - (19%)
Similarity:219/587 - (37%) Gaps:140/587 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ELMVSVHPSGRQRLKYIMANPSEKSTQLSR--------QMALTVMETENVTLDQHGMYHYEGGWP 82
            |||..|.|..|:.....  |.||:::|...        ||........:.|.:|..:|       
  Rat   181 ELMAPVQPKERKLTNQF--NFSERASQTFNNPLRDRECQMEPPPRTNFSATANQWEIY------- 236

  Fly    83 KEVNFNDEEQTQRHRKKVEREDSWGEQVLSM-IRTTMSVAEQNNTLN------------IYQNFF 134
             :...::.|:.::.::|.:.:....::...| :|...|:..|::.:.            :.||.:
  Rat   237 -DAYVDELEKLEKTKEKEKTKTPVAKKTEKMAMRKLTSMESQSDDITKVTQAAKIVERMVNQNTY 300

  Fly   135 ADLPPELGHDIKMRFRARVANVFHD-------LWL----PARQL--RSIEWMPNNSRQFMTQYTN 186
            .|:..:      .::....|:.:.|       ||.    .|::|  .::.|.|        :|.:
  Rat   301 DDVAQD------FKYYEDAADEYRDQEGTLLPLWKFQNDKAKRLAVTALCWNP--------KYKD 351

  Fly   187 HFAKGERLRPVTDEPFGGTNGF--------YVWDVKNPLKPRITYDSKQQVSLAKIC---PKDEN 240
            .||.|.           |:..|        .::.:|||..|...:.|:..:    :|   ..|..
  Rat   352 LFAVGH-----------GSYDFMKQSRGMLLLYSMKNPSFPEYMFSSESGI----MCLDMHMDHP 401

  Fly   241 NMV------GGTGL-------GQVCLWGTFKGGLPIRNCPLEVSHRETTSALCWVHS--KSNTEF 290
            .:|      |...:       .|.|...|.|.|          .|.:....:.|...  ..|..|
  Rat   402 YLVVVGYYDGNVAIYNLKKPHSQPCFRSTSKSG----------KHTDPVWQVKWQKDDMDHNLNF 456

  Fly   291 YSGSLDGSIKYW---DTRDLKMPMQELLLEPEPQERQSRMDSHGV---TVLEFEYTIPVRFIIGS 349
            :|.|.||.|..|   .:..:.:.:.:|..|....|....:..|.|   |..:|...|...|::|:
  Rat   457 FSVSSDGRIVSWTLVKSELVHIDVIKLKDEGSTTEIPEGLQLHTVGCGTAFDFHKEIDYLFLVGT 521

  Fly   350 DMGHVFVGNRKGMTP-METLLAHYQLFVGPVRSINRNPFFVKNFL-VTGDWRARIWSEEVKDSPS 412
            :.|.::..::...:. ::|..||..    .|.::..||:..:.|: .:.||..:||...:| :|.
  Rat   522 EEGKIYKCSKSYSSQFLDTYDAHNM----AVDAVLWNPYHARVFISCSSDWTVKIWDHAIK-TPM 581

  Fly   413 TMYFRKNAQILCGAWSTGRCSLFVTGDINGVVDFWDLLLHHRKPIRS----VDFKVAIADLVFRP 473
            .:| ..||.:...||:....::|.....:|....:||.::..:.|.:    ...|..|..:.|.|
  Rat   582 FIY-DLNAAVGDVAWAPYSSTVFAAVTTDGKAHVFDLAVNKYEAICNQPVVAKKKNKITHVQFNP 645

  Fly   474 EGDLLAIGLKNGDTHIMTLDESMRQATGKEKALMAAMFEREIVRCKLLE-ARYDEV-----RLKR 532
            ...::.:|...|....:.|..::|:...::|.       :|:.:...:| |:.|::     .:|.
  Rat   646 IHPIIIVGDDRGHITCLKLSPNLRKMPKEKKG-------QEVQKGPAVEIAKLDKLLNLVREVKT 703

  Fly   533 KT 534
            ||
  Rat   704 KT 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:475233 58/281 (21%)
WD40 repeat 229..269 CDD:293791 9/55 (16%)
WD40 repeat 277..325 CDD:293791 12/52 (23%)
WD40 repeat 332..369 CDD:293791 8/40 (20%)
WD40 repeat 379..415 CDD:293791 10/36 (28%)
WD40 repeat 422..447 CDD:293791 4/24 (17%)
Dnai1NP_001019513.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 122..169
WD40 repeat 340..386 CDD:293791 12/64 (19%)
WD40 <358..616 CDD:475233 57/277 (21%)
WD 1 386..426 6/43 (14%)
WD40 repeat 392..433 CDD:293791 7/40 (18%)
WD 2 435..478 10/42 (24%)
WD40 repeat 440..494 CDD:293791 12/53 (23%)
WD40 repeat 505..542 CDD:293791 7/36 (19%)
WD 3 543..583 12/44 (27%)
WD40 repeat 548..587 CDD:293791 11/40 (28%)
WD 4 585..625 8/39 (21%)
WD40 repeat 590..631 CDD:293791 7/40 (18%)
WD 5 633..672 8/38 (21%)
Blue background indicates that the domain is not in the aligned region.

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