DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1571 and SdicA

DIOPT Version :10

Sequence 1:NP_572435.1 Gene:CG1571 / 31725 FlyBaseID:FBgn0029993 Length:651 Species:Drosophila melanogaster
Sequence 2:NP_001303576.1 Gene:SdicA / 26067074 FlyBaseID:FBgn0283432 Length:533 Species:Drosophila melanogaster


Alignment Length:449 Identity:110/449 - (24%)
Similarity:184/449 - (40%) Gaps:69/449 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 KEVNFNDEEQTQ------RHRKKVEREDSWGEQVLSMIRTTMSVAEQNNTLNIYQNFFADLPPEL 141
            ||||...|||.|      ..::.|.|.....|:.||            ..::||.::......|.
  Fly   117 KEVNELSEEQKQMIILSENFQRFVVRAGRVIERALS------------ENVDIYTDYIGGGDSEE 169

  Fly   142 GHDIKMRFRARVANVFHD-LWLPARQLRSIEWMPNNSRQFMTQYTNHFAKGERLRPVTDEPFGGT 205
            .:|.:...|..:..||:| .|...|.:.|::|..:.....:..|.|:       ....:||.|..
  Fly   170 ANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNN-------EESPNEPDGVV 227

  Fly   206 NGFYVWDVK-NPLKPRITYDSKQQVSLAKICPKDENNMVGGTGLGQVCLW-GTFKGGLPIRNCPL 268
               .||:.| ....|...:..:..|........:.|.::|||..||:.|| ...:...||:..||
  Fly   228 ---MVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPIQRTPL 289

  Fly   269 E-VSHRETTSALCWVHSKSNTEFYSGSLDGSIKYWDTRDLKMPMQELLLEPEPQERQSRMDSHGV 332
            . .:|......|..|.:::.....|.|.||.:..|....|..|...|    |.|:|||:  :..:
  Fly   290 SAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTL----ELQQRQSK--AIAI 348

  Fly   333 TVLEFEYTIPVRFIIGSDMGHVFVGNRKGMTPMETLLAHYQLFVGPVRSINR-----NPFFVKNF 392
            |.:.|........::||:.|:|:..:|.|:  ...:...|:..:||:..|:.     :|.|...|
  Fly   349 TSMAFPANEINSLVMGSEDGYVYSASRHGL--RSGVNEVYERHLGPITGISTHYNQLSPDFGHLF 411

  Fly   393 LVTG-DWRARIWSEEVKDSPSTMYFRKNAQ-ILCGAWSTGRCSLFVTGDINGVVDFWDLLLHHRK 455
            |.:. ||..::||  :||:.....|..|:. ::..|||....:||...|.:|.:|.|:|      
  Fly   412 LTSSIDWTIKLWS--LKDTKPLYSFEDNSDYVMDVAWSPVHPALFAAVDGSGRLDLWNL------ 468

  Fly   456 PIRSVDFKVAIADLV-----------FRPEGDLLAIGLKNGDTHIMTLDESMRQATGKE 503
               :.|.:|.||.:|           :.|.|..:.||.:.|..::..:.|::.|.:..|
  Fly   469 ---NQDTEVPIASIVVAGAPALNRVSWTPSGLHVCIGDEAGKLYVYDVAENLAQPSRDE 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1571NP_572435.1 WD40 210..462 CDD:475233 67/261 (26%)
WD40 repeat 229..269 CDD:293791 12/40 (30%)
WD40 repeat 277..325 CDD:293791 13/47 (28%)
WD40 repeat 332..369 CDD:293791 8/36 (22%)
WD40 repeat 379..415 CDD:293791 11/41 (27%)
WD40 repeat 422..447 CDD:293791 8/24 (33%)
SdicANP_001303576.1 Dynein_IC2 21..51 CDD:463291
WD40 196..512 CDD:475233 84/344 (24%)
WD40 repeat 196..245 CDD:293791 11/58 (19%)
WD40 repeat 251..289 CDD:293791 10/37 (27%)
WD40 repeat 298..337 CDD:293791 10/42 (24%)
WD40 repeat 349..435 CDD:293791 22/89 (25%)
WD40 repeat 441..479 CDD:293791 14/46 (30%)
WD40 repeat 487..513 CDD:293791 5/25 (20%)
Blue background indicates that the domain is not in the aligned region.

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