Sequence 1: | NP_001259317.1 | Gene: | Ubr3 / 31713 | FlyBaseID: | FBgn0260970 | Length: | 2236 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038960775.1 | Gene: | Ubr3 / 311115 | RGDID: | 1565257 | Length: | 1901 | Species: | Rattus norvegicus |
Alignment Length: | 2284 | Identity: | 737/2284 - (32%) |
---|---|---|---|
Similarity: | 1078/2284 - (47%) | Gaps: | 556/2284 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 98 SSVAAAAAPPPPPPRT---GPTTTTSSGTAAESGAASALSDD-AGAKPSFFFGASSFSLRSRKEV 158
Fly 159 AALINTECCRGSPTPDLDSIMDTLFNPGTPIDNL-----------------DNIEWIRWLIAGGR 206
Fly 207 TPQEFVKIVRSYDNHAKCGLVWVPHVVAYRCRTCGISPCMSICRDCFKKGNHTNHDFNMFLSQAG 271
Fly 272 GACDCGDTSVMKAEGFCSDHGINNRVNRDPVPNNLLAVAEAIMPKLLFRLLQHFRE-----HSDT 331
Fly 332 PLE------VQAITSYSCEEFANMLIDLNNMGEIMRKVMTRTLINPEVY----AFFMEAPCQDTR 386
Fly 387 NGRFLKANREKYEDAVN----RFPN-------PEPPDEYRDLPALG------------------- 421
Fly 422 ------------------------DKLVHTTLLEEFIFWTFKFEFPQTLVCFLLNMLPDQDYKEH 462
Fly 463 LTRTFVMHYSRIPSVLEMSRDPDTLSNRVVHMSVQLFSNESLALKMVNELSLLHVMIISLKLMMS 527
Fly 528 KILIQNTLHDPNKNFHFVIDCTRQVMKDHCYWPLVSDFNNVLSHESVALVFLRDDNLIDMWFQFL 592
Fly 593 QMLQGMNVNVRETASHVEFEPNSYYAAFSCELEASAYPMWSIISHLQDGTHAHLAKKIINYCVTT 657
Fly 658 LHEWLDSIYFMEARLSMEEMMQASFHFPLHRYLAAFVCQAVTKMGISLNDVLPSRPYLLPLLMIH 722
Fly 723 PLRVQSFFYEILAGKWVRNGLQIKGQAMTYIQANFCNSMADMDLFFLQICATNLPQYFFLQNTIE 787
Fly 788 LFDVGQWLETAPLKQPQKAE---QSSMLEGFLTFLATLVTSRTNLG--NDEATQCIIEISALLAT 847
Fly 848 ENKTHSQLLELMPE----RSGNV-HTKNFETFLKKLSVYKAP---SSGSENLEQGLFTPIDEVWE 904
Fly 905 KHYDPLHVLLRAVHRRDFQSSLDRFTNYVKSKDKMPASGNLWPPFRLPHALPATSSFSDPCKILN 969
Fly 970 SRIFHSTILSIFFRAV--HTRDVSEHLLALAVFLLEIAVETS------DDVGSGTGDRAPPALAA 1026
Fly 1027 VVESSSGPGYHGYGTGRHEPPKLFHCYPTDNLSCNLRHVVKKVSLKSRDPQVITSSYRSNPFYSD 1091
Fly 1092 LDFEVEADPEQSMRMIGQGDPEGDEATGGAGLGMGAHSRR-------NVSQALVPMRVPGMEVAL 1149
Fly 1150 PPDLSVVAETGVVIRQDSNEDDLLREGNHAMDMSPPAALDFHFPLQQITLPESGMEVAIRRDLLL 1214
Fly 1215 AETNNMGAIAGGAGGGANASATPPAGASNEMFSPTTPTGSGMLLPFQRVQPVAVPSSGNMDIVPS 1279
Fly 1280 NAMGAGGSFTSGVSGSGTGRRMNYETGGARKRSVDIAIGGSNKDELHLDESILSLLLKLHSQLSG 1344
Fly 1345 TLDSFS---LSDGEDQSSDDDSTMDVDCNEASTSMAAAESTALAERGRSKRNYKNIHVSSSRIGD 1406
Fly 1407 GPFFIGNLLRKIAKQDEQCAQSIDDIRARLWPNQREKQAEAKAREAKEKEERRKKARERQQKMMQ 1471
Fly 1472 DFANKQKLFMQSAAASSSGMGYGPEDEDDEELYEEQPREKE--YDCIICNCTTPSTESNPIGLVV 1534
Fly 1535 LVESSGIVGHRRRIAERLPLPINAEDESRLAHTTRLAAEFNRRTELLSLKFGDESWYLSNNMAYD 1599
Fly 1600 NGVHVQSCGHHVHLSCLEAYLKTLYTTQRQPVQ----DRGEFYCPVCRQLSNSVLPLSPQLDRPT 1660
Fly 1661 HL-VRSGNQPFERLVADLTDLIKENE-----------TIPQPTKLTEAMGHAMEVMTNIAQRKVK 1713
Fly 1714 CSSITFRKL---FIFVTSIARTNLEAEIIQRGGSLCTANATRYKPKRECIVPLLHVLSVHVRVLV 1775
Fly 1776 EWPLWSSWASLAGL------PVTATEPLPAHCLELIPSILADPIALLLKFILLAPLQLDQDYFTC 1834
Fly 1835 MVKVMYNLLYYQIVVQLCVTLTDLECDHIVKVYGSTSVGSDNSAAESQQQESAAGTTNNRRRAGQ 1899
Fly 1900 QQQSSSQLGKA----MALVLSQTNDLVHLRRDCIPSTSSSAAASAAGSSSTTSTNHGASAATASS 1960
Fly 1961 ATTIEVNLKSMELQLQALCLPFLRVAALLRQHLYRHEMPEISAPGLEFVRLVYYLELV-----TD 2020
Fly 2021 -------SMDWDCFNASKGLCFIPGTETTLPQFWCQQLMEVRPPADTVRE--LVLINQHSLWQQP 2076
Fly 2077 RLLELPREYERLFTYYHERPCLNCYKVPKESSICLLCGTIVCLKQNCCAENDCCEAVRHTLSCGG 2141
Fly 2142 GIGIFLVVTSTYIIVIRGRRACLWGSLYLDDFDEEDRDLKRGKPLYLSKDRFNLLESQWLSHKFA 2206
Fly 2207 HTKHTWVFH 2215 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Ubr3 | NP_001259317.1 | zf-UBR | 224..291 | CDD:280386 | 48/66 (73%) |
FliJ | <1410..1477 | CDD:280262 | 23/66 (35%) | ||
Ubr3 | XP_038960775.1 | zf-UBR | 117..184 | CDD:396677 | 47/66 (71%) |
RING-H2_UBR3 | 1242..1380 | CDD:319397 | 36/140 (26%) | ||
PRT6_C | 1438..1884 | CDD:408765 | 139/474 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166343841 | |
Domainoid | 1 | 1.000 | 913 | 1.000 | Domainoid score | I43 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H52092 | |
Inparanoid | 1 | 1.050 | 1059 | 1.000 | Inparanoid score | I239 |
OMA | 1 | 1.010 | - | - | QHG60185 | |
OrthoDB | 1 | 1.010 | - | - | D34639at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005748 | |
OrthoInspector | 1 | 1.000 | - | - | oto95987 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105451 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR21497 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X4143 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.910 |