Protein Alignment hdm and R03H10.6

DIOPT Version :10

• Sequence 1: NP_572422.1
• Gene: hdm / 31705
• FlyBaseID: FBgn0029977
• Length: 486
• Species: Drosophila melanogaster
• Sequence 2: NP_494733.2
• Gene: R03H10.6 / 187558
• WormBaseID: WBGene00019858
• Length: 324
• Species: Caenorhabditis elegans
• Alignment Length: 127
• Identity: 23/127 - (18%)
• Similarity: 38/127 - (29%)
• Gaps: 40/127 - (31%)

  Fly    82 VVDIVGAKVMSIPFAAPGE-----------------------QRYQPQATVSCALVVNEGSGYVV 123
            :.|..|..:..:.|.|.||                       ..|....|.:|.:::.......:
 Worm    38 LTDTYGESIRCVAFGAAGEYCKRELKLNELCYVMDGKIQLKSDDYPSYTTHACEIIIFNEHNVKI 102

  Fly   124 RHDNDDFGQITILQQLLHQPIRPL----------GAVLKLADVRSGLGFPDKIIT---TNVN 172
            |.::....|..........||..|          |.|..:.|.|.    |:|:.:   |:||
 Worm   103 RQEDPATDQNVDAPPAAVTPIANLNDSVDNFKIHGRVTLMDDKRR----PEKVFSFEITDVN 160

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hdm	NP_572422.1	None
R03H10.6	NP_494733.2	Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold.	7..103	CDD:471953	9/64 (14%)
		rpa1	<104..>322	CDD:273177	13/61 (21%)