DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and AT2G15900

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_179190.3 Gene:AT2G15900 / 816086 AraportID:AT2G15900 Length:994 Species:Arabidopsis thaliana


Alignment Length:1107 Identity:201/1107 - (18%)
Similarity:381/1107 - (34%) Gaps:298/1107 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 AVIW----YYPTFFLFFAFVVYSLVLVFAAV----AGTVYIHYIFTTNEPTPPSRVPSRLLYNAT 117
            ||.|    :..|:||....:.:.|.|..|.:    |...:.|:.|....|..|.:  |:|.|...
plant    18 AVWWCLCIFSVTYFLTHTSIYWWLNLPIAILICGGARFFFNHFEFRWKVPATPRQ--SQLSYLEK 80

  Fly   118 KS------NIFDLPKPIKNPSNLPLIFGKTVDLQLQQIIEYVLRDFMLPWLGYVVTKPKLINDVV 176
            |.      .:..:|.|   |.....|....|:..:...|:.:|.||::.....::|..|...:::
plant    81 KQLSVNDPRLSGIPPP---PRWKKKIDSPVVEAAINDFIDKILNDFVVNLWYSLITPDKEAPELI 142

  Fly   177 REDLWNAIQKIHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEARAAETNTPPVFSTNS------ 235
            |..:.:|:.:|..|...::...::..|:|:.:..|||..|..:| |..|:.....|:..      
plant   143 RAVIMDALGEISVRVKEINIVDLLTRDIVDLIGDHLESFRRNQA-AIGTDVMKTLSSEERDERLK 206

  Fly   236 -----------YLADEEKEMEFLRKL-CEIMVILLLPRGYSLPPLKVLLSEILSYKIFFPMIKML 288
                       .|...|.|.:.|:|: ..|:.::|.||....|.::.:..||::..:..|::. |
plant   207 YHLMASGELYPALVSPESEYKVLQKIVAGILSVVLRPREAQCPLVRTIAREIVTCLVIQPLLN-L 270

  Fly   289 TAPDYINQKVVQNIETRLAAAAMSKRSYEYAASFEDFLKIINNSGNLEELSLIRKSIVNDLMHAT 353
            ..|:.||:                        .||..:.:| ..||.|:.:...:::.:..:.|.
plant   271 ACPERINE------------------------VFEIIINLI-KEGNFEQFTAEEQNVNSAPLSAF 310

  Fly   354 TMQ----NL-----QRAKGLDPDHED-----HSLS-----------KSELTAAVRLKR-YVRQLT 392
            ..|    ||     |::..::..|.|     ||..           ::|:.....|:. :.:...
plant   311 DSQAKNMNLTKAIEQKSPNINDRHPDLHVQQHSADWARSLEVATQRRTEVLRPENLENMWTKGRN 375

  Fly   393 MAKGECEKNLAKFGWNGNYSSDIDLTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEEIKHA 457
            ..|.|.:|:|.|                   .::.|.:...:...|.|.|.  ......:..:..
plant   376 YQKKEYKKSLKK-------------------GSSTGAKENAVAQLPPKVST--DKQSQAQMAEEF 419

  Fly   458 HKSASHQLGTEIFYTYI-----------RVPKSEIQIDKHERKLIETFLLGDAEPDIFYDIQRNV 511
            .||:.|..|.:|:...:           |:.:|....|.:.|......|||.:|..:        
plant   420 SKSSLHDGGHQIYEADVRKESRSDGNKNRLKRSNSTSDLNLRPETSLALLGVSEGPL-------- 476

  Fly   512 LRTLEEKYYPPFVL-SDQYRQLKEALDSNEIADPTL---------LMCHTIGDVQEPLADEQPGA 566
               :.|.|...|:. :|.|      :..|:.....|         |.|..:|...|.        
plant   477 ---ITEFYTTDFIKHNDNY------ISDNKSQSIVLHKEGQHCLKLKCRVLGAYFEK-------- 524

  Fly   567 ADGLNGGAGGAI------DVAAHTSYARRKLEQIQERIDKKNQALDALKYSVK-PESKVLTILEK 624
                .|....|:      ||...|.:.:|:.... ||:.:  |..:...|::: |..::.:    
plant   525 ----QGSKSFAVYSIAVTDVENKTWFVKRRYSNF-ERLHR--QLKEIPNYNLQLPPKRIFS---- 578

  Fly   625 EMEWLKSEKRQTEAHLR--RTDAWTEHLGKWKATIQSVEVSDEKESLQFMILVHVDEDI--NAPV 685
                  |.......|.|  :.|.:.:.|      :....|:::.|...|:.....:...  ::.|
plant   579 ------SSTEDAFVHRRCIQLDKYLQDL------LCIANVAEQHEVWDFLSAASKNYSFGKSSSV 631

  Fly   686 QPTSSKNGDSGHANLRKRPSGISSGWV--VMRSLNQVHELQRKLRHVSSNLKAIDLPTNFKFFFL 748
            ..|.:.|.|....::.::..|:|.|.:  |:.|....|: ....||:|.::..|           
plant   632 MKTLAVNVDDAMDDIVRQFKGVSDGLMRKVVGSPLDEHD-HAPTRHLSWSVNEI----------- 684

  Fly   749 KTDRHGQEKAKSQIQKFLNFILEDDHL--------------NG----SEAIYTFLSPSSDHL--- 792
             :.:..:|.|...:...::...:.|.|              ||    :|....::.|.....   
plant   685 -STQLSRESATESMHSSISDTEDIDKLGENTQGEGRFDSEANGWHSDNELDSKYVPPRVVRRLGE 748

  Fly   793 KQSLPSPKKSKFSLSTLFRSDAGKAHEASKATDPFWGLQRDDEDISTYLDGESGGEAKMLAADLD 857
            .:|.||.|::.|...:..|......|     .||...|.::...|..::                
plant   749 PESSPSEKENDFKAKSQVRGSTDFQH-----ADPLTALVQNPHGIPEWM---------------- 792

  Fly   858 SKDSIAEPMYALMGEIFDMG--GVFKWLRKSLI----SFVQITYGRTINRQIRESVAYLFEESML 916
             ..:::.|:..|:.::|.:.  |   |||:.:.    ..:|:.....::..:...:.:|..|..:
plant   793 -PPNVSVPILNLVDKVFQLNRRG---WLRRQVFWISKQILQLVMEDAVDDLLMREICWLRNEDTI 853

  Fly   917 HNYFSAILKSFWPGGVLASAYPTRSEDMREMT--------------------------------- 948
            ...........||.||    :.||..|.:|.:                                 
plant   854 AQGIRWAQDILWPNGV----FFTRLNDSQEASDETDPSEKTYQMAGQLGGMKVTKPSSFEQQLEA 914

  Fly   949 ---TTAAKALLTDHIPEVLCNLVGAQAAKRGVLKVFDALQNPAYNKQLFYELLEILMIEFFPEIR 1010
               .:..|..|.|..|..|.:|||....:|....:|...|:....|||.:.:||:|:...|||::
plant   915 FRRASEIKKFLFDGAPTALVSLVGHNQYRRCARDIFYFTQSNICIKQLTFAILELLLRSVFPELQ 979

  Fly  1011 QL 1012
            .|
plant   980 DL 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484 38/175 (22%)
RGS_SNX25 422..531 CDD:188675 22/120 (18%)
PX_SNX25 645..788 CDD:132788 25/164 (15%)
Nexin_C 882..987 CDD:462541 25/144 (17%)
AT2G15900NP_179190.3 PXA 105..286 CDD:460484 40/206 (19%)
PX_SNX19_like_plant 513..619 CDD:132782 23/136 (17%)
Nexin_C 815..955 CDD:462541 24/143 (17%)

Return to query results.
Submit another query.