DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and snx24

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001028903.1 Gene:snx24 / 619249 ZFINID:ZDB-GENE-050913-45 Length:172 Species:Danio rerio


Alignment Length:151 Identity:34/151 - (22%)
Similarity:55/151 - (36%) Gaps:35/151 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   699 NLRKRPSGISSGWVVM--------------RSLNQVHELQRKLRHVSSNLKAIDLPTNFKFFFLK 749
            :.|...|.:..|:.|.              :..::.|.|.|.|:.:   :|..::|:       |
Zfish    10 SFRSEGSTVEKGYTVFKIEVLMCGRQHTVEKRYSEFHALHRMLKKI---IKPPEIPS-------K 64

  Fly   750 TDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSPSSDHLK-QSLPSPKKSKFSLSTLFRSD 813
            ..|:...|...|.::.|...|:...:........||    |.|. :..||..|::...|....||
Zfish    65 HVRNWVPKVLEQRRQGLELYLQTIIMENEVLPKIFL----DFLNIRHFPSLPKTESCGSFETESD 125

  Fly   814 AGKAHEASKAT-DPFWGLQRD 833
                 |:||.| .|....|||
Zfish   126 -----ESSKLTHQPALLYQRD 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 18/102 (18%)
Nexin_C 882..987 CDD:462541
snx24NP_001028903.1 PX_SNX22 4..113 CDD:132790 22/116 (19%)
Blue background indicates that the domain is not in the aligned region.

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