DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and snx19b

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_021328604.2 Gene:snx19b / 568980 ZFINID:ZDB-GENE-030131-6331 Length:956 Species:Danio rerio


Alignment Length:999 Identity:186/999 - (18%)
Similarity:347/999 - (34%) Gaps:295/999 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 QLQQIIEYVLRDFMLPWLGYVVTKPKLINDVVREDLWNAIQKIHERALRMDAAKIIAVDMVNRVT 209
            ::|:.::.::|||:..|.. .|:..:...|.|...:.:...::..||.|:| .|.::..:::...
Zfish    95 EIQKTVDKIVRDFVTSWYS-TVSDEQEFEDEVHNAMISMAMELKGRASRVD-RKTLSQRVLDLSG 157

  Fly   210 VHLEKIRIAEARAAETNTPPVFSTNSYLADEEK-------EMEFLRKLCEIMVILLLPRGYSLPP 267
            .||:....|..:........::.|.|.|.....       |:.::|.:.::::.:|:|     ||
Zfish   158 CHLQGFLSASGKQEVDKDGDLWGTYSKLCPPHPALQSAAVEVNYVRAIVDLLLHVLVP-----PP 217

  Fly   268 L------KVLLSEILSYKIFFPMIKMLTAPDYINQKVV-------------QNIETR---LAAAA 310
            .      :.::.|:::..:..|:|..|:.||::|..:|             :.:|.:   ...:|
Zfish   218 HLETRTGRFVVGELITCNVILPLIAKLSDPDWLNLLIVSIFTQSSEPGSEPEPVEIQSPPQVVSA 282

  Fly   311 MSKRSYEYAASFEDFLKIINNSGNLEELS---LIRKSIVNDLMHATTMQNLQRAKGLDPDHEDHS 372
            ......|.|......||:..::.|:.|.|   |....:: |.....:..||:         ||.|
Zfish   283 QENAQQELAVPCVLTLKVTPDTPNITEASTPELAAYDVI-DSAELFSPHNLE---------EDES 337

  Fly   373 LSKSELTAAVRLKRYVRQLTMAKGECEKNLAKFGWNGNY---SSDIDLTLVEILNTAVGRRYFTL 434
            .:..........:.|:|            |:|  .|..|   .||::..|.:....:        
Zfish   338 RTTKPFPLGFSPRDYLR------------LSK--PNPFYQETDSDLESPLTDFKRGS-------- 380

  Fly   435 FLEPLKASALIGFYLAVEEIKHAHKSASHQLGTEIFYTYIRVPKSEIQIDKHERKLIETFL-LGD 498
                |::..|||          ..::.|.:| ||. .|.:. |..:::.|      :.|:. ..:
Zfish   381 ----LESLVLIG----------TEETLSERL-TEC-VTPVD-PLLDLEDD------LPTYTNTAE 422

  Fly   499 AEPDIFYDIQRNVLRTLEEKYYPPFVLSDQYRQLKEALDSNEIADPTLLMCHTIGDVQEPLADEQ 563
            .||...:.      .::.|:....|.......:...::|...:.:|..|..:|      |:....
Zfish   423 KEPSAAHS------ASVPEEEASSFCTLQPSEKCNSSIDQPGLLNPGDLALNT------PIQVTS 475

  Fly   564 PGAADGLNGGAGGAIDVAAHTSYARRKLEQIQERIDKKNQALDALKYSVKPESKVL--------T 620
            ||..                .|.|....|.:.                 .||..|:        |
Zfish   476 PGGM----------------ASLAPFNFEPLS-----------------SPEGPVIIQNLRITGT 507

  Fly   621 ILEKEMEWLKSEKRQTEAHLRRTDAWTEHLGKWKATIQSVEVSDEKESLQFMILVHVDEDINAPV 685
            |..|       |.|.|.:|     .:|.:..|::..:.    |:..||||             |:
Zfish   508 ITAK-------EHRGTGSH-----PYTLYTVKYETAMD----SENPESLQ-------------PL 543

  Fly   686 QPTSSKNGDSGHANLRKRPSGISSGWVVMRSLNQVHELQRKLRHVSSNLKAI-DLPTNFKFFFLK 749
            ...:.....|...||:.|             |.:..||::.|::|....|.. :||      |..
Zfish   544 AYHTVNRRYSEFLNLQTR-------------LEEKPELRKILKNVKGPKKIFPELP------FGN 589

  Fly   750 TDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSPSS------------------------- 789
            .|....|..|..::.||..:........||.:..||:.::                         
Zfish   590 MDSDKVEARKGLLETFLRQLCAIPETANSEEMQEFLALNTDARIAFVKKPFIVSRIDKIVVNAIV 654

  Fly   790 DHLKQSLP-----SP---------------KKSKFSLSTLFRSDAGKAHEAS-----------KA 823
            |.||.:.|     ||               ||||..:.  |.|....|...|           ::
Zfish   655 DTLKTAFPRSEPQSPTDDIDGEPDGKLSTDKKSKSRMR--FSSKIAPALSVSDMKPNVVYCFDES 717

  Fly   824 TDPFWGLQRDDEDISTYLDGESGGEAKMLAADLDSKDSI-------------AEPMY-------- 867
            :..|.|...:  ::.:::..:...|.|....|.|::.|:             |.|..        
Zfish   718 STVFNGFLLN--ELESFISEKERSEGKAPGFDADAEKSVGSGPKLDLKTCMCARPQLENAPSFSE 780

  Fly   868 -----ALMGEIFD-----MGGVFKWL-RKSLISFVQITYGRTINRQIRESVAYLFEESMLHNYFS 921
                 ||..:..:     |...:.|| .:::...:::.:|..:.|.:...|..|........|..
Zfish   781 SAEETALSNQTLNILCMLMKNQWSWLCTENIQKTIRMLFGTLLERWLEVGVGNLTCTPYWVVYLQ 845

  Fly   922 AILKSFWPGGVL-ASAYPTRSEDMREMTTTAAKALLTDHIPEVLCNLVGAQAAKRGVLKVFDALQ 985
            .:.::.||||.| |...|.||:..:|.:...|...|...:|:::.:::|::..|.....|.|:.|
Zfish   846 VLQEAIWPGGNLPAQPRPQRSQQQKEHSRKQALQCLMKLMPDLISDMLGSEKYKVFWQTVVDSFQ 910

  Fly   986 NPAYNKQLFYELLEILMIEFF-PE 1008
            :|..|:.|.|.|.: |:|||. ||
Zfish   911 DPTVNRHLVYCLWD-LLIEFLVPE 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484 33/180 (18%)
RGS_SNX25 422..531 CDD:188675 16/109 (15%)
PX_SNX25 645..788 CDD:132788 30/143 (21%)
Nexin_C 882..987 CDD:462541 25/106 (24%)
snx19bXP_021328604.2 None

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