DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and snx14

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_005160372.2 Gene:snx14 / 555970 ZFINID:ZDB-GENE-040724-144 Length:942 Species:Danio rerio


Alignment Length:1093 Identity:215/1093 - (19%)
Similarity:382/1093 - (34%) Gaps:314/1093 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 YPTFFLFFAFVVYS----------LVLVFAAVAGTVYIHYIFTTNEPTPPSRVPSRLLYNATKSN 120
            ||..|..|..::.|          |::.::.:||.:..:...     :|...:|:.|:...||. 
Zfish    27 YPVIFCIFTVMISSTIILNQYLHILMVFWSFLAGVITFYCSL-----SPEYLLPNILISIKTKR- 85

  Fly   121 IFDLPKPIKNPSNLPL-----IFGKT-------------------------VDLQLQQIIEYVLR 155
                 ||.:.....||     :.||.                         ||..:.:::|.||.
Zfish    86 -----KPQEQHELFPLGHSCAVCGKNQCKRHRPTLLLENYQPWLNLKVPSKVDASISEVLELVLE 145

  Fly   156 DFMLPWLGYVVTKPKLINDVVREDLWNAIQKIHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEA 220
            :|:.||. ..:|..:...|.:|:.:......:..||.|:|...::...|:.....|:|.|..|:.
Zfish   146 NFVYPWY-RDITDDEACVDELRQTIRFFAAVLAHRAQRVDVPSVVMDKMMKAAMKHIEIIAKAQQ 209

  Fly   221 RAAETNTPPVFSTNSYLAD-------EEKEMEFLRKLCEIMVILLLPRGYSLPP-------LKVL 271
            :...|:.....:...|.||       .:.|:.:||||.|    ||.|  |.:||       |.:|
Zfish   210 KVRNTDGLEQAALAEYGADLHVALRSRKDELLYLRKLTE----LLFP--YLMPPKATDCRSLALL 268

  Fly   272 LSEILSYKIFFPMIKMLTAPDYINQKVVQNIETRLAAAAMSKRSYEYAASFEDFLKIINNSGNLE 336
            :.|:::..:|.|::..:..||.:|..|:..|:                                 
Zfish   269 IREVMTGSVFLPIMDFVADPDTVNHMVLIFID--------------------------------- 300

  Fly   337 ELSLIRKSIVNDLMHATTMQNLQRAKGLDPDHEDHSLSKSELTAAVRLKRYVRQLTMAKGECEKN 401
                                          |.....::....|....|:|:....|         
Zfish   301 ------------------------------DTPPEPVTDPPSTLVPFLERFADPRT--------- 326

  Fly   402 LAKFGWNGNYSSDIDLTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEE---------IKHA 457
                    ..||.:.|.|.||.........|..||:...|..::.|.|.|||         :...
Zfish   327 --------KKSSVLKLDLKEIREQQDLLFRFMSFLKEEGAVHVLQFCLTVEEFNDRILCPDLSDD 383

  Fly   458 HKSASHQLGTEIFYTYIRVPKSEIQIDKHERKLIETFLLGD----AEPD-----------IFYDI 507
            .|...|:...:|:.||.    .|..|||..   .:.|::.:    ||..           ..::.
Zfish   384 EKQRLHEEVKKIYETYC----LEESIDKIS---FDPFIIEEIHSIAEGPYTGVVKLQTMRCLFEA 441

  Fly   508 QRNVLRTLEEKYYPPFVLSDQYRQLKEALDSNEIADPTLLMCHTIGDVQEPLADEQPGAADGLNG 572
            ..:||..||:.:.|.|..||:|.:              .|:|          ..|.|.....||.
Zfish   442 YEHVLCLLEKVFTPMFCHSDEYFR--------------HLLC----------GAESPARNSKLNR 482

  Fly   573 GAGGAIDVAAHTSYARRKLEQIQ-ERIDKKNQAL---DALKYSVKPESKVL-----TILEKEMEW 628
            ..  ::|...:||   ::.|... .||..|.:.:   ..::.::.|:..::     |:.|..|.:
Zfish   483 NL--SLDDLRNTS---KRGESFGISRIGSKIKGVFKSSTMEGAMLPQYAMIEGEDDTVEEAVMVF 542

  Fly   629 LKSEKRQTEA-----HLRRTDAWTEHLGKWKATIQSVEVSDEKESLQFMILVHVDEDINAPVQPT 688
            ........:|     .||...|||       .:|..|:..|::...:.:.:..:|      |:..
Zfish   543 EDDSPGPMDAVGTPGTLRNLSAWT-------ISIPYVDFYDDEVKKERIPVFCID------VERN 594

  Fly   689 SSKNGDSGHANLRKRPSGISSGWVVMRSLNQVHELQRKLRHVSSNLKAIDLPT-------NFKFF 746
            ..||  .||.         :..|.|.|...:.:.|:.||.......:...||:       |::|.
Zfish   595 DRKN--VGHE---------TESWSVYRKYVEFYVLESKLTEFHGPFQDAQLPSKRIIGPKNYEFL 648

  Fly   747 FLKTDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSP---SSDHLKQSLPSPKKSKFSLST 808
            ..|         :.:.:::|..:|....|:.|:.:..||||   .|....:.||.     .:|..
Zfish   649 SSK---------RGEFEEYLQKLLHHPELSNSQLLADFLSPFSMESQFRDKMLPD-----VNLGK 699

  Fly   809 LFRSDAGK-AHEASKATDPFWGLQRDDEDISTYLDGESGGEAKMLAADLDSKDSIAEPMYA---- 868
            :|:|..|| ..|..:..:||  :|.......:.....|..|..:|:...::...:...:|.    
Zfish   700 IFKSVPGKLIKEKGQNLEPF--IQSFFSSCESPKPKPSRPELTILSPTAENNKKLFNELYRNNAN 762

  Fly   869 ------------LMGEIFDMGG-----------VFK---WLRKSLISFVQITYGRTINRQIRESV 907
                        ...|:.::.|           ||:   ||. .|:|.|:|...||:...:....
Zfish   763 LPEGLEKKHNQNYFMELMEVDGAYDYMMYIGRVVFRMPDWLH-HLLSGVRILLKRTLEAYVGHYF 826

  Fly   908 AYLFEESM-LHNYFSAILKSFWPGGVLASAYPTRSEDMREMTTTAAKALLTDHIPEVLCNLVGAQ 971
            .|..|:.| .|...|  |.:.....|...:...||.:.::.........:.:::|:::...:|.:
Zfish   827 QYKLEQIMEEHRLVS--LVTLLRDAVFCESTEERSPEDKQRRAKQTFEEMMNYLPDIVGKCIGEE 889

  Fly   972 AAKRGVLKVFDALQNPAYNKQLFYELLEILMIEFFPEIRQLRVSNSNGTKLNT 1024
            |...||..:|:.:|.|..|||:.|.||:|.:.|.|||:.:   :...|..::|
Zfish   890 AKYDGVKMLFNTIQQPLLNKQMTYVLLDIAIQELFPELSK---NQKQGLSVST 939

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484 45/171 (26%)
RGS_SNX25 422..531 CDD:188675 31/132 (23%)
PX_SNX25 645..788 CDD:132788 31/152 (20%)
Nexin_C 882..987 CDD:462541 24/105 (23%)
snx14XP_005160372.2 None

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