DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and snx21

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001070836.1 Gene:snx21 / 555580 ZFINID:ZDB-GENE-061013-557 Length:395 Species:Danio rerio


Alignment Length:325 Identity:62/325 - (19%)
Similarity:109/325 - (33%) Gaps:86/325 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 DSNEIADPTLLMCHTIGDVQEPLADEQPGAADGLNGGAGGAIDVAAHTSYARRKLEQIQERIDKK 601
            :|:|:.|....:...:|..   |..|..|..|..:.|     ||:...|.:    :...|.||..
Zfish    33 ESSELEDDIDCVSARLGGT---LCFEADGVLDSEDAG-----DVSGPDSDS----DFFGESIDNA 85

  Fly   602 NQALDALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHL--RRTDAWTEHLGKWKATIQSVEVSD 664
            ..:.:.......|:|..:...:.:..|..|..|.....|  ..|||...|....|..:.::.|  
Zfish    86 CSSTETSPIGPSPKSSNMLTRQLQENWRNSRARCVPEKLIFEVTDASVVHETNSKYVLYTIHV-- 148

  Fly   665 EKESLQFMILVHVDEDINAPVQPTSS-KNGDSGHANLRKRPSGISSGWVVMRSLNQVHELQRKLR 728
                      :|.......|...|.. .:.:..|:.||:...|         :::.|:..::|||
Zfish   149 ----------IHAGTFDKTPAVITRRYTDFERLHSRLRRHYGG---------NIDGVYFPRKKLR 194

  Fly   729 --------------------HVSSNLKAIDLPTNFKFFFLKTDRHGQ-----EKAKSQIQKFLNF 768
                                |:.|.......||..:||:|...|.||     .:.:..:...||.
Zfish   195 KNFAAETIAKRSRAFEQYLTHLHSLPDLRTTPTFLEFFYLGDLRAGQMLMRVGRYQDALHSLLNS 259

  Fly   769 I-LEDD-------HLNGSEAIYTFLSPSSDHLKQSLPSPKKSKFSLSTLFRSDAGKAHEASKATD 825
            : |::.       .||..:.::.|.:.|                :|.|.|: |..:.:||.:..|
Zfish   260 LRLQEKLGCHQLLQLNQLQRVHWFFTLS----------------ALVTCFQ-DLEQLNEAQEHCD 307

  Fly   826  825
            Zfish   308  307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 31/176 (18%)
Nexin_C 882..987 CDD:462541
snx21NP_001070836.1 PX_SNX21 124..235 CDD:132834 24/131 (18%)
Blue background indicates that the domain is not in the aligned region.

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