DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and snx13

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_021323912.1 Gene:snx13 / 503733 ZFINID:ZDB-GENE-050306-12 Length:966 Species:Danio rerio


Alignment Length:1054 Identity:234/1054 - (22%)
Similarity:405/1054 - (38%) Gaps:233/1054 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 LAVIWYYPTFFLFFAFVVYSLVLVFAAVAGTVYIHYIF-TTNEPTPPSRVPSRLLYNATKSNIFD 123
            |.|:.:..:|..|..|.:...:|.|  :.|...:..:| .||......|.....:. .|::.:..
Zfish    15 LGVVLFLISFGPFAIFYLAFYILCF--IGGGFVVLLLFGKTNSEKHLERCEHSYML-PTQTAVLK 76

  Fly   124 LPKPIKNPSNL-----PLIFGKTVDLQLQQIIEYVLRDFMLPWLGYVVTKPKLINDVVREDLWNA 183
            :.:.:|:.|.|     .|.....:|..|||:|::.|||::..|. |.::..:.....:|..:.||
Zfish    77 VLEEMKSESKLIKIDRRLTGSNIIDEPLQQVIQFALRDYIQYWY-YTLSDDETFLLEIRLTVQNA 140

  Fly   184 IQKIHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEARAAETNTPPVFSTNSYLADE----EKEM 244
            :.:...|:..:|........:|:....||...|.|:.:..|...|........|.|.    |.||
Zfish   141 LVEFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQEKLNEKEDPKQRDDPDELLDSFFEVEVEM 205

  Fly   245 E-----------------FLRKLCEIMVILLLPRG-YSLPPLKVLLSEILSYKIFFPMIKMLTAP 291
            |                 :||.|||:::.||||.| :....::..|.|:|:..:..|:|..|:.|
Zfish   206 ERKICRDVVCMSRKDEEGYLRDLCEVLLYLLLPPGDFHSKNMRYFLREVLARGVLLPLINQLSDP 270

  Fly   292 DYINQKVVQNIETRLAAAAMSKRSYEYAASFEDFLKIINNSGNLEELSLIRKSIVNDLMHATTMQ 356
            |||||.|:..|.             :.:.::|.||.|:..:....||..::..:         ::
Zfish   271 DYINQFVIWMIR-------------DSSCNYEAFLNILKLTDEPSELEAVKDKV---------LE 313

  Fly   357 NLQRAKGLDPDHEDHSLSKSELTAAVRLKRYVRQLTMAKGECEKNLAKFGWNGNYSSDIDLTLVE 421
            .||..:.||...:|.::.|:::.:.:.:|: |.:..:.:.:..|.:.......|:.....:.|..
Zfish   314 ELQYLRSLDTGSDDINIIKNQINSLLFVKK-VCETRIQRIQSGKEVDALKLAANFGKLCVIPLEH 377

  Fly   422 ILNTAVGRRYFTLFLEPLKASALIGFYLAVE--------------EIKHAHKSASHQ-------- 464
            ||...:..::|..:::.:...|::.|:|.||              ..:...|..|.|        
Zfish   378 ILVHNIALQFFMDYMQCMGGQAILFFWLTVEGYRVTAQQQLEVLQSCQRDGKRQSSQTTKGLLRA 442

  Fly   465 --LGTEIFYTYIRVPKS-EIQIDKHE-RKLIETFLLGDAEPDIFYDIQRNV--LRTLEEKYYPPF 523
              ||  :|..|:....| .:|:|:.. .:|.:.....|..|:||.:|||.|  :....|.|||.|
Zfish   443 AALG--VFDQYLSEKASPRVQVDEASVTRLAQKLNKEDPTPEIFDEIQRKVYDMMLKHEHYYPSF 505

  Fly   524 VLSDQYRQLKEALDSNEIADPTLLMCHTIGDVQEP-LADEQPGAADGLNGGAGGAIDVAAHTSYA 587
            .....|.::...||.                ::|| ......|..:..||...|:|         
Zfish   506 RQHPLYVRMLAELDM----------------LKEPSYRGSDDGDGESFNGSPTGSI--------- 545

  Fly   588 RRKLEQIQERIDKKNQALDALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHLRRTDAWTEHLGK 652
                          |.:||.|...                                         
Zfish   546 --------------NLSLDDLSSG----------------------------------------- 555

  Fly   653 WKATIQSVEVSDEKESLQFMILVHVDEDINAPVQPTSSKNGDSGHAN-------LRKRPSGISSG 710
                  ||   ||...|...|....|..:| |: |.:....|.|...       :||...|....
Zfish   556 ------SV---DESVQLHAFISDTADAFLN-PL-PVAGVCNDHGKTYALYTITVIRKNSDGSEDT 609

  Fly   711 WVVMRSLNQVHELQRKLRHVSSNLKAI-DLPTNFKFFFLKTDRHGQEKAKSQIQKFLNFILEDDH 774
            |...|..:..|:...::.....:|..| .||.  |..|...||...||.|..:..:|..:|..:.
Zfish   610 WKTYRRYSDFHDFHMRITEQFESLAPILKLPG--KKTFNNMDREFLEKRKKDLNAYLQLLLNPEM 672

  Fly   775 LNGSEAIYTFLSPSSDHLKQSLPSPKKSKFS---------LSTLFR--SDAGKAHEASKATDPFW 828
            :.....:..::   .|.|:....|..|.:|:         |.:..|  |:|.|:...|.|.    
Zfish   673 VKACPILMPYV---YDFLENKAYSKGKREFARKMDTFVNPLRSSMRNVSNAVKSLPDSLAE---- 730

  Fly   829 GLQRDDEDISTYLDGESGGEAKM--------------------LAADLDSK--DSI-AEPMYALM 870
            |:.:...|:.. :..:.|.:.|.                    ::|.||..  |:| ...|..||
Zfish   731 GVSKVSADMGR-MSEKLGQDIKQSIFKVPPLIQKSDIDPEHCRVSAQLDDNVDDNIPLRVMLLLM 794

  Fly   871 GEIFDMGGVFKWLRKSLISFVQ----ITYGRTINRQIRESVAYLFEESMLHNYFSAILKSFWPGG 931
            .|:||:....:|||:::.:.:|    .|||.||||:|.:.|..:.....:.:|......|:||.|
Zfish   795 DEVFDLKDRNQWLRRNIKNLLQQLIKATYGDTINRKIVDHVDNMTSPEQVSDYVKRFRDSYWPNG 859

  Fly   932 VLASAYPTRSEDMREMTTTAAKALLTDHIPEVLCNLVGAQAAKRGVLKVFDALQNPAYNKQLFYE 996
            :||...|.|.:::|..|..|||..|...:|:.|.:::||...::|:|:||:..|:...|::|.|.
Zfish   860 ILAETPPRRDKNLRMRTRVAAKTTLLGIMPDELKHIIGADTTRKGILRVFEMFQHQPLNRRLVYV 924

  Fly   997 LLEILMIEFFPEIR 1010
            .||..:...||:.:
Zfish   925 FLEGFLETLFPQYK 938

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484 51/179 (28%)
RGS_SNX25 422..531 CDD:188675 33/136 (24%)
PX_SNX25 645..788 CDD:132788 31/150 (21%)
Nexin_C 882..987 CDD:462541 37/108 (34%)
snx13XP_021323912.1 PXA 98..284 CDD:470618 52/199 (26%)
RGS 378..513 CDD:470619 33/136 (24%)
PX_SNX13 559..690 CDD:132783 30/137 (22%)
Nexin_C 806..915 CDD:462541 37/108 (34%)

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