Protein Alignment snz and CG5439

DIOPT Version :10

• Sequence 1: NP_572421.1
• Gene: snz / 31704
• FlyBaseID: FBgn0029976
• Length: 1117
• Species: Drosophila melanogaster
• Sequence 2: NP_609607.1
• Gene: CG5439 / 34710
• FlyBaseID: FBgn0032476
• Length: 520
• Species: Drosophila melanogaster
• Alignment Length: 608
• Identity: 107/608 - (17%)
• Similarity: 207/608 - (34%)
• Gaps: 206/608 - (33%)

  Fly   300 QNIETRLAAAAMSKRSYEYAASFEDFLKIINNSGNLEELSLIRKSIVNDLMHATTMQNLQRAKGL 364
            :::.::||.:...:|..:.....::....|:...:.:||:..|...|.:|  ..:::.|.
  Fly    16 RSMRSQLAGSTFGQRREDIFRRLQESAHKISQKFSGKELATERDESVQEL--CESLEELM----- 73

  Fly   365 DPDHEDHSLSKSELTAAVRLKRYVRQL-TMAKGECEKNLAKFGWNGNYSSDIDLTLVEILNTAV- 427
                 .:.|.:|..|::.....:::.: .|..|..          |..|::.|.|..|...|.:
  Fly    74 -----SYGLRQSAGTSSFSAASFIQNMQEMVSGNA----------GGGSNNNDATFWEFCQTHLT 123

  Fly   428 -------------------GRRYFTLFLEPLKASALIGFYLAVEEIKHAHKSASHQLGTEIFYTY 473
                               ||.:....|...:..:.:..:|:.||..|.            |||
  Fly   124 PHERQRYMDLKQIWTNVGRGRAFIRATLNEKRLHSHVLTWLSDEEQLHR------------FYT- 175

  Fly   474 IRVPKSEIQIDKHERKLIETFLLGDAEPDIFYDIQRNVLRTLEEKYYPPFVLSDQYRQLKEALDS 538
               |.|.:..|:..:||.|   :.|:..|:.:.:..:.......:...|.|      .:||
  Fly   176 ---PWSLLLNDEAAKKLPE---IVDSLSDVLFALNVDTTELNAPRRSTPSV------AVKE---- 224

  Fly   539 NEIADPTLLMCH---TIGDVQEP-LADEQP----GAADGLNGGAGGAIDVAAHTSYARRKLE--Q 593
                :|.:....   .:|..:.| :|.|:|    .:.:.|.|              |.:.:|  :
  Fly   225 ----EPIIFTTSPVPVVGRQKRPGIAVERPIECVSSTEDLLG--------------ALKPIESVE 271

  Fly   594 IQERIDKKN--QALDALKYSVKPESKV----LTILEKEMEWLKSEKRQTEAHL-------RRTDA 645
            :|:.:.|::  |.|      .:|:.:|    ...:|.|:|:||:......||:       .|:|.
  Fly   272 VQQILSKESIEQEL------AQPQEEVNLGPFDPIEPELEFLKTPLPDIGAHVGESELYEDRSDT 330

  Fly   646 ---WT-------------------EHLGKWKATIQSVEVSDEKESLQFMILVH--VDEDINAPVQ 686
               |:                   ||:.:.......:|....:.|||..:|:.  ..:.....:.
  Fly   331 SSQWSKSSSSANCLANSQQQAALEEHVNQLNERCALLETRVAELSLQNRLLIRRLTKQFEETGID 395

  Fly   687 PTSS---------------KNGDSG-------HANLRKRPSGISSGWVVMRSLNQVHELQRKLRH 729
            |:||               |...||       |..:|:|    ...|...|..::.::|.:.|..
  Fly   396 PSSSLCSNFLITIPHVKLAKTQRSGSHYTYEVHITMRQR----LEHWTFFRRYSEFYKLHKSLLK 456

  Fly   730 VSSNLKAIDLPT-----NFKFFFLKTDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSPSS 789
            ....:.|::.|.     |....|:       |:.:.|:|.:|        ||
  Fly   457 THPVVSAVEFPPKKHFGNMNLVFV-------EERRQQLQIYL--------LN------------- 493

  Fly   790 DHLKQSLPSPK--KSKFSLSTLF 810
              |.::||..:  |||..|..:|
  Fly   494 --LVETLPQVEACKSKAELQKVF 514

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snz	NP_572421.1	PXA	142..300	CDD:460484	107/608 (18%)
		RGS_SNX25	422..531	CDD:188675	21/128 (16%)
		PX_SNX25	645..788	CDD:132788	31/193 (16%)
		Nexin_C	882..987	CDD:462541
CG5439	NP_609607.1	RUN	37..206	CDD:459241	36/209 (17%)
		PX_RUN	404..520	CDD:132810	28/145 (19%)