DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and Snx15

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001019923.1 Gene:Snx15 / 293691 RGDID:1305803 Length:338 Species:Rattus norvegicus


Alignment Length:393 Identity:75/393 - (19%)
Similarity:134/393 - (34%) Gaps:119/393 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   630 KSEKRQTEAHLRRTDAWTEHLG--KWKATIQSVEVSDEKESLQFMILVHVDEDINAPVQPTSSKN 692
            :::|.....|...:|..|...|  ::|.|.|.:...|.::..:.::.....:        ....:
  Rat     4 RAKKDDFLRHYTVSDPRTHPKGYTEYKVTAQFISKKDPEDIKEVVVWKRYSD--------FRKLH 60

  Fly   693 GDSG--HANLRKR----PSGISSGWVVMRSLNQVHELQRK----LRHVSSNLKAIDLPTNFKFFF 747
            ||..  |.||.:|    |: .....|..|....|.|.:||    |...:..:.|::.....|.||
  Rat    61 GDLAYTHRNLFRRLEEFPA-FPRAQVFGRFEASVIEERRKGAEDLLRFTVPIPALNNSPQLKEFF 124

  Fly   748 LKTDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSPSSD--HLKQSLPSPKK--------- 801
                |.|:....|::.:.|..:...          ...:|.||  .|.|.||:.::         
  Rat   125 ----RGGEVTRPSEVSRDLQILPPP----------LIPTPPSDEARLLQPLPAERRGQEELEVPV 175

  Fly   802 -------SKFSLSTLFRSDAGKAHEASKATDPFWGLQRDDEDIS---TYLDGESGG-----EAKM 851
                   ::.:|..||..|:.:...:|.|..|.     .:.:::   .|...||.|     .:::
  Rat   176 DPLPSSPAQEALDLLFCCDSTEEASSSPARGPL-----SEAELALFDPYSKEESTGPSPTHTSEL 235

  Fly   852 LAADLDSKDSIAEPMYALMGEIFDMGGVFKWLRKSLISFVQITYGRTINRQIRE------SVAYL 910
            .|.::.||....||        ::.||                      |:..|      :.|||
  Rat   236 AAMEVQSKRLDQEP--------WEPGG----------------------REEEEAEDGDPAPAYL 270

  Fly   911 FEESML---------HNYFSAILKSFWPG------GVLASAYPTRSEDMREMTTTAAK--ALLTD 958
            .:.:.|         ...::|.|:.:..|      ||.....|||.|.:::......|  ..|..
  Rat   271 GQATELITQALRNEKAGAYAAALQGYQEGVHILLQGVSGDPSPTRREGVKKKAAEYLKRAETLHA 335

  Fly   959 HIP 961
            |:|
  Rat   336 HLP 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 28/154 (18%)
Nexin_C 882..987 CDD:462541 19/103 (18%)
Snx15NP_001019923.1 PX_domain 10..127 CDD:470617 27/129 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 134..155 4/30 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 240..270 9/59 (15%)
MIT_SNX15 268..338 CDD:239140 16/69 (23%)
Blue background indicates that the domain is not in the aligned region.

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