DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and Rps6kc1

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_001402719.1 Gene:Rps6kc1 / 289342 RGDID:1306578 Length:1045 Species:Rattus norvegicus


Alignment Length:736 Identity:152/736 - (20%)
Similarity:250/736 - (33%) Gaps:235/736 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 PRGYSLPPLKVLLSEILSYKIFFPMIKMLTAPDYINQKVV-------QNIETRLAAAAMSKRSYE 317
            ||||::            ||:...::.... |:.:.:.:|       :.:...|  ..:.:.::.
  Rat    24 PRGYTI------------YKVTARVVSRRN-PEDVQEIIVWRRYSDFKKLHREL--WQIHRNAFR 73

  Fly   318 YAASFEDFLKIINNSGN---------LEELSLIRKSIVNDLMH-ATTMQNLQRAKGLDPDHEDHS 372
            ::..|..|.|     |.         :||    |:....||:. :..:..|..:|.|....:...
  Rat    74 HSELFPPFAK-----GTVFGRFDKTVIEE----RRQCAEDLLQFSANIPALYNSKQLQDFFKGGI 129

  Fly   373 LSK-SELTAAVRLKRYVRQLTMAKGECEKNLAKFGWNGNYSSDIDL--------TLVEI------ 422
            :|. |||....  :.|...|.....||       |..| :|||.||        :|.|:      
  Rat   130 ISDGSELIGPA--EAYPDSLANTFSEC-------GTEG-FSSDSDLLSLTVDADSLAEVDDGMAS 184

  Fly   423 ---------------LNTAVG----------------RRYFTLFLEPL--------KASALIGFY 448
                           .::|||                |..|...|:|.        ||..||...
  Rat   185 RQGSPSRAFGLSVSADSSAVGAVASDIEPSKAEDRESRSLFPSSLKPRLGRRDYLEKAGELIKLA 249

  Fly   449 LAVEEIKHAHKSAS--HQLGTEIFYTYIRVPKSEIQIDKHERKLIETFLLGDAEPDIFYDIQRNV 511
            |..|| :..:::||  ::.|.::....::...|..:.:..:|:..|..:..::...:      .|
  Rat   250 LKKEE-EDDYEAASDFYRKGVDLLLEGVQGESSPTRREAVKRRTAEYLMRAESICSL------RV 307

  Fly   512 LRTLEEKYYPPFVLSDQ----YRQLKEALDSNE---IADPTLLMCHTIGDVQEPLADEQPGAADG 569
            ...|:....||..||.:    .|...|.|.:..   :.|..||:..|        ..||.....|
  Rat   308 TAQLDTGPQPPGALSSRPPWNLRSPAEELKAFRVLGVIDKVLLVMDT--------RTEQTFILKG 364

  Fly   570 LNGGAGGAIDVAAHTSYARRKLEQIQERIDKKNQALDALKYSVKPESKVLTILEKE--------M 626
            |.           .:|...|..:.|..|.......|..  |.:..||..|.:...|        .
  Rat   365 LR-----------KSSECSRNRKTIIPRCVPNMVCLHT--YIISEESVFLVLQHAEGGKLWSYIS 416

  Fly   627 EWLKSEKRQT------------EAHLRRTDAWTEHLGKWKATIQSVEV--SDEKESLQFMILVHV 677
            ::|....|::            ...|::..|..:  |.:     |||.  ||....|:.:     
  Rat   417 KFLNRSSRESLDIKEARPPMPPRVRLQQPSASPQ--GSY-----SVESRGSDTGSMLKVL----- 469

  Fly   678 DEDINAPVQPTS---SKNGDSGHANLRKRP-SGISS------GWVVMRSLNQVHELQRKLRHVSS 732
              .:...:.|:|   |...|.|..:..|.| ||.||      |::.:  .|:..  |.||...|.
  Rat   470 --PLKTSLTPSSQDDSNQEDDGQDSSPKWPDSGSSSEEECTAGYLTL--CNEYG--QEKLDLTSL 528

  Fly   733 NLKAIDLPTNFKFFFLKTDRHGQEKAKSQIQKFLNFILEDDHLN---------GSEAIYTFLSP- 787
            |.:::..|..             |.|.||..:.....|..|..:         |.|.:....|| 
  Rat   529 NEESVMQPEG-------------ENADSQAVRSFPASLTADSASPSTQLKFFPGDEGLEAVCSPR 580

  Fly   788 SSDHLKQSLPSPKK-----SKFSLSTLFRSDAG-KAH----EASKATDPFWGLQRDDEDISTYLD 842
            :||.|::|..||.:     ||.|.|.|...|:| |.|    |..||   .:.|:..|....::..
  Rat   581 TSDSLRRSKNSPMEFFRIDSKDSTSELLGLDSGEKLHSLKPEPLKA---LFTLEDGDSPSQSFDA 642

  Fly   843 GESGGEAKMLAADLDSKDSIA 863
            |:|.||:       :::|||:
  Rat   643 GKSQGES-------EAQDSIS 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484 8/46 (17%)
RGS_SNX25 422..531 CDD:188675 26/159 (16%)
PX_SNX25 645..788 CDD:132788 37/164 (23%)
Nexin_C 882..987 CDD:462541
Rps6kc1NP_001402719.1 PX_RPK118_like 11..128 CDD:132820 21/127 (17%)
MIT_SNX15 237..305 CDD:239140 13/68 (19%)
Protein Kinases, catalytic domain 334..>420 CDD:473864 20/106 (19%)
STKc_RPK118_like <858..1035 CDD:270728
Blue background indicates that the domain is not in the aligned region.

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