DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and Snx19

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_030099808.1 Gene:Snx19 / 102607 MGIID:1921581 Length:998 Species:Mus musculus


Alignment Length:1077 Identity:200/1077 - (18%)
Similarity:351/1077 - (32%) Gaps:344/1077 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KTVDLQLQQIIEYVLRDFMLPWLGYVVTKPKLINDVVREDLWNAIQKIHERALRMDAAKIIAVDM 204
            :.::.::.:.|:.::|||:|.|...|..:|....: :...:...:|::..|...:|:..     :
Mouse    96 RQLEQEINRTIQMIIRDFVLSWYRSVSHEPAFEAE-MEAAMKGLVQELRRRMSIVDSHA-----L 154

  Fly   205 VNRVTV----HLEK-IRIAEARAAETNTP-----------PVFSTNSYLADEEKEMEFLRKLCEI 253
            ..||..    ||:. |:..||.|.|.:.|           .|.:.:..::....|:.:.|.:..:
Mouse   155 TQRVLTLCGCHLQSYIQAKEATAKEQSCPVQPSQLWDAYCQVTAPHPAMSCPTTEVTYARGIVNL 219

  Fly   254 MVILLLPRGYSLPPLKV-----LLSEILSYKIFFPMIKMLTAPDYINQKVVQNIETRLAAAAMSK 313
            ::..|:|:    |.|:.     ::.|:::..:..|:|..|:.||:|:..:|         :..||
Mouse   220 ILKELVPK----PHLETRTGRHVVVEVITCNVILPLISKLSDPDWIHLILV---------SIFSK 271

  Fly   314 RSYEYAASFEDFLKIINNSGNLEELSLIRKSIVNDLMHATTMQNLQRAKGLDPD----------- 367
            ..::.|..    .|...:|..||:     .|:...|.....:::|...|...|.           
Mouse   272 YRHDAAQG----TKPPCSSSVLEQ-----PSVPTSLPLIVEVESLPVGKASSPATAPVHLTSSEP 327

  Fly   368 ------HEDHSLSKSELTAAVRLKRY-----------VR---------QLTMAKGECEKNLAKFG 406
                  .|.|...:.:|...:..|:.           :|         :|.....|..|......
Mouse   328 APSPEIEEGHEAVEGDLPGMLEEKKVGNSSSHFLQPDIRGPLFLCEDSELESPLSELSKETILLM 392

  Fly   407 WNGNYSSD-IDLTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEEIKHAHKSASHQLGTEIF 470
            ..||:.|| |...|..:.::..        |||..     |......|...|.::......|.:.
Mouse   393 TPGNFLSDRIQDALCALDDSGA--------LEPKD-----GEGSECMEGAEAEEAPGTDTETGML 444

  Fly   471 YTYIRVPKSEIQIDKHERKLIETFLLGDAEPDIFYDIQRNVLRTLEEKYYP-PFVLSDQYRQLKE 534
            .:.:..|  |||||..::::.:    ||         ..::...|||...| |...|...:.|..
Mouse   445 VSVLNCP--EIQIDTADKEVEQ----GD---------DTSLTALLEEPEKPCPLRPSCLDKDLAS 494

  Fly   535 ALDSNEIADPTLLMCHTIGDVQEPLADEQPGAADGLNGGAGGAIDVAAHTSYARRKLEQIQERID 599
            .:.|.|.|.|.:           ||:...||.                 .|.|....|.:.    
Mouse   495 GVCSLEPAMPPV-----------PLSSSPPGP-----------------LSSATFSFESLS---- 527

  Fly   600 KKNQALDALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHLRRTDAWT--EHLGK-------WKA 655
                         .|:..|:.                 .:||.|...|  ||.|.       :..
Mouse   528 -------------SPDGPVVI-----------------QNLRITGTITAREHSGTGFHPYTLYTV 562

  Fly   656 TIQSVEVSDEKESLQFMILVHVDEDINAPVQPTSSKNGDSGHANLRKRPSGISSGWVVMRSLNQV 720
            ..::|...:....|| .:..|.   :|...:.         ..||:.|             |.:.
Mouse   563 KYETVLNGENSSGLQ-QLAYHT---VNRRYRE---------FLNLQTR-------------LEEK 601

  Fly   721 HELQRKLRHVSSNLKAI-DLPTNFKFFFLKTDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTF 784
            .:|::.:::|....|.. |||    |..:.:||  .|..||.::.||..:.....:..||.:..|
Mouse   602 PDLRKFIKNVKGPKKLFPDLP----FGNMDSDR--VEARKSLLESFLKQLCAIPEIGNSEEVQEF 660

  Fly   785 LSPSSDHLKQSLPSPKKSKFSLSTLFRSDAGKAHEASKATDPFWGLQRDD--------------- 834
            |:.::|.....:..|    |.:|   |.|..|| .|.:...|....||||               
Mouse   661 LALNTDARIAFVKKP----FMVS---RIDKAKA-LAGELFSPSAKAQRDDCPALYHCPSGTCKTV 717

  Fly   835 ------------------------------EDISTYLDGESGGEAKMLA---------------- 853
                                          :|...|...|...|:::|:                
Mouse   718 LILYLQPCRWWSRLRFSSSKIAPALSIAEAQDKILYCLQEGNSESEVLSMSGMESFIEKQTKLLR 782

  Fly   854 ---ADLDSKDSIAEPMYALMGEIFDMGGV------------------------------FKWL-R 884
               |::..||....|...:...:.|...|                              :||| .
Mouse   783 IQPAEVPDKDPQQVPKEYVDSGLLDKAVVAQELNKSGPGTETELADTAFDLILLLLMEQWKWLCT 847

  Fly   885 KSLISFVQITYGRTINRQIRESVAYLFEESMLHNYFSAILKSFWPGGVLAS-AYPTRSEDMREMT 948
            :|:..|:.|.:|..:.|.:...||.|........|...:.:|.||||||.. ..|.|::..:..|
Mouse   848 ESMQKFLHIIFGTLVQRWLEVQVANLTCPQRWAQYLHLLRESIWPGGVLPKFPRPGRTQAQKAAT 912

  Fly   949 TTAAKALLTDHIPEVLCNLVGAQAAKRGVLKVFDALQNPAYNKQLFYELLEILMIEFFPEIRQLR 1013
            ...|...|.|.:|:.|..::|....:.....|.::.|.|..|:.|.|.|.:|::     |:..| 
Mouse   913 EKQALQSLMDLLPDFLVEILGVNKCRLSWSLVLESFQQPLINRHLIYCLGDIIL-----ELLDL- 971

  Fly  1014 VSNSNGTKLNTATAGAAAASAAAALVAATASASLPSL 1050
                          .|:....|.|..|:.:..||..:
Mouse   972 --------------SASVEECAPATSASDSPGSLKKM 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484 35/178 (20%)
RGS_SNX25 422..531 CDD:188675 21/109 (19%)
PX_SNX25 645..788 CDD:132788 31/152 (20%)
Nexin_C 882..987 CDD:462541 29/106 (27%)
Snx19XP_030099808.1 PXA 95..273 CDD:214611 38/195 (19%)
PX_SNX19 537..664 CDD:132803 34/158 (22%)
Nexin_C 844..951 CDD:462541 29/106 (27%)

Return to query results.
Submit another query.