DRSC/TRiP Functional Genomics Resources

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Protein Alignment snz and Snx21

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_030102304.1 Gene:Snx21 / 101113 MGIID:1917729 Length:372 Species:Mus musculus


Alignment Length:346 Identity:68/346 - (19%)
Similarity:111/346 - (32%) Gaps:98/346 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   678 DEDINAPVQPTSSKNGDSGH-ANLRKRPSGISSGWVVMRSLNQVHEL-------QRKLRHVSSNL 734
            |||..|.:....|.:|.||. |.....|.|..|..::.|.|....:.       ||.|..|:|..
Mouse    65 DEDDEAGLDSPPSGDGASGEDAERSPPPDGQRSSQLLARQLQDFWKKSRNTLVPQRLLFEVTSAN 129

  Fly   735 KAIDLPTNFKFFFLKTDRH----------GQEKAKSQI-QKFLNFILEDDHLNGSEAIYTFLSPS 788
            ...|.|:.:..:.:..:..          ..::..:|| :::.:|  |..|.|...   .|..|.
Mouse   130 VVKDPPSKYVAWVISEEPQLYTLAVMGPGPPDRQPAQISRRYSDF--ERLHRNLQR---QFRGPM 189

  Fly   789 SDHLKQSLPSPKK---SKFSLSTLFRSDAGKAHEASKATDPFWG--------------------- 829
            |     ::..|:|   ..|:..|:.|        .|:|.:.|.|                     
Mouse   190 S-----AISFPRKRLRRNFTAETIAR--------RSRAFEQFLGHLQAVPELRQAPDLQDFFVLP 241

  Fly   830 -LQRDDEDISTYLDGES---GGEAKMLAADLDSKDSIAEPMYALMG------EIFDMGGVFKWLR 884
             |:|......|.|..|:   ...|..|...|.:......|:..|.|      |:.|.|..     
Mouse   242 ELRRAQSLTCTGLYREALALWANAWQLQTQLGTPSGPDRPLLTLAGLAVCHQELEDPGEA----- 301

  Fly   885 KSLISFVQITYGRTINRQIRESVAYLFEESMLHNYFSAILKSF----WPGGVLASAYPTRSEDMR 945
                            |...|....|..:...|.:.:..|::.    |..|:.......:.:.::
Mouse   302 ----------------RACSEKALQLLGDKRPHPFLAPFLEAHVRLSWRLGLDKRQSEAQLQALQ 350

  Fly   946 E--MTTTAAKALLTDHIPEVL 964
            |  :|:|...:|....|.|||
Mouse   351 EAGLTSTPPPSLKELLIKEVL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484
RGS_SNX25 422..531 CDD:188675
PX_SNX25 645..788 CDD:132788 28/128 (22%)
Nexin_C 882..987 CDD:462541 15/89 (17%)
Snx21XP_030102304.1 PX_domain 121..241 CDD:470617 23/137 (17%)
TPR_12 243..312 CDD:315987 16/89 (18%)
TPR repeat 243..267 CDD:276809 6/23 (26%)
TPR repeat 280..311 CDD:276809 8/51 (16%)
TPR repeat 325..352 CDD:276809 3/26 (12%)
Blue background indicates that the domain is not in the aligned region.

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