DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snz and snx25

DIOPT Version :10

Sequence 1:NP_572421.1 Gene:snz / 31704 FlyBaseID:FBgn0029976 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_004911239.1 Gene:snx25 / 100127563 XenbaseID:XB-GENE-1001658 Length:1046 Species:Xenopus tropicalis


Alignment Length:1005 Identity:317/1005 - (31%)
Similarity:529/1005 - (52%) Gaps:107/1005 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 IVSGITLTLLAVIWYY---------PTFFLFFAFVVYSLVLVFAAVAGTVYIHYIFTTNEPTPPS 106
            ::..:.:.||||..::         |...|.|..::....:..|...|.:.:......:....|:
 Frog   112 LILAVVICLLAVSLFHLAQGIGQPSPAGELCFTVLLLRCFVYLACALGALILGAFCVLHRTGRPT 176

  Fly   107 RVPSRLLYNATKSNIFDLPKPIKNPSNLP--LIFGKTVDLQLQQIIEYVLRDFMLPWLGYVVTKP 169
            .:|.......|..::  ||:.:..|.. |  ::....:|..|:::.:|..||::|.|.|.:....
 Frog   177 ALPDFTRAARTTGSL--LPRIVHEPVQ-PRRVVISHNMDKALKEVFDYSYRDYILSWYGDLTKDD 238

  Fly   170 KLINDVVREDLWNAIQKIHERALRMDAAKIIAVDMVNRVTVHLEKIRIAEARAAETNTPPVFSTN 234
            ..:...:.:|.|...:::..|...:|..:::..|:|..:..|..:::.|.:|..|  .|.:|:.:
 Frog   239 GQLYHFLSDDFWELARQLRSRLTHIDVVRVVCNDVVKNLLAHFCELKAASSRQDE--QPRLFALH 301

  Fly   235 SYLADEEKEMEFLRKLCEIMVILLLP-RGYSLPPLKVLLSEILSYKIFFPMIKMLTAPDYINQKV 298
            ..|.:.|:|::||:...:::|:.||| |......|:::|||||:.|:..|::::|:.||||||.:
 Frog   302 PCLKNSEEEVKFLQSCAQVLVLCLLPTRDARSRCLRIVLSEILATKVLKPLVELLSDPDYINQML 366

  Fly   299 VQNIETRLAAAAMSKRSYEYAASFEDFLKIINNSGNLEELSLIRKSIVNDLMHATTMQNL-QRAK 362
            :..:|.|.......|::|.||.|:|:|:|:|.:|.::|.|..:|..||.:::.|||:.:. |..:
 Frog   367 LSQLEYREQVNERHKKAYTYAPSYEEFIKLITSSSDVEFLKQLRYQIVVEIIQATTIGSFPQMKR 431

  Fly   363 GLDPDHEDHSLSKSELTAAVRLKRYVRQLTMAKGECEKNLAKFGWNGNYSSD---ID-------- 416
            ..||..::.:..|::|..|..:|||:.|||:||.:|||.:...|.......|   :|        
 Frog   432 QKDPKGKETAAMKADLLRARNMKRYINQLTVAKKQCEKRIKLLGGPAYDQQDDGAVDDSECPQSQ 496

  Fly   417 --LTLVEILNTAVGRRYFTLFLEPLKASALIGFYLAVEEIKHAHKSASHQLGTEIFYTYIRVPKS 479
              |...|||.....|..|.|::|.:...|||.|:.:||.:|:|:|:...||..||:..|. |...
 Frog   497 KILQFDEILANPSFREQFRLYMERIDKRALISFWESVEYLKNANKTEIPQLVGEIYQNYF-VESK 560

  Fly   480 EIQIDKHERKLIETFLLGDAEPDIFYDIQRNVLRTLEEKYYPPFVLSDQYRQLKEALDSNEIADP 544
            :|.::|...|.|:..|:|:...::|..||.:|..||:::|||.|::||.|.:|....|:      
 Frog   561 DIPVEKPLYKEIQQSLVGNKGTEVFNKIQADVYETLKDRYYPSFIVSDLYDRLIRKEDN------ 619

  Fly   545 TLLMCHTIGDVQEPLADEQPG--AADG-------LNGGAGGAIDVAAHTSYARRKLEQIQERIDK 600
              :.|..:.|      |::.|  |.:|       .|||      :....|||..||:|:.:|:|.
 Frog   620 --VSCSCVTD------DKEDGMQACEGNEEILDECNGG------ITEQASYAVNKLQQLTDRLDY 670

  Fly   601 KNQALDALKYSVKPESKVLTILEKEMEWLKSEKRQTEAHLRRTDAWTEHLGKWKATIQSVEVSDE 665
            |.|||:::..:.||:.|:::.|::|:..::.|:...:.|:.|||.|.|:||.|:|.|.:.:||:|
 Frog   671 KRQALNSIINAPKPDKKIISKLKEEIALMEKEQSDLDLHISRTDLWCENLGMWRAVINTSQVSEE 735

  Fly   666 KESLQFMILVHVDEDINAPVQPTSSKNGDSGHANLRKRPSGISSGWVVMRSLNQVHELQRKLRHV 730
            .........|    .:|.|         |||.:..|        .|:|.|.|::...|.|||...
 Frog   736 NGEQMPSYTV----SVNLP---------DSGESENR--------NWIVHRKLSEFQNLHRKLSEC 779

  Fly   731 SSNLKAIDLPTNFKFFFLKTDRHGQEKAKSQIQKFLNFILEDDHLNGSEAIYTFLSPSSDHLKQS 795
            ..:||.:.||:..|..|...|:...||:|:|:..||..:|.|:.|..||.:|.|||||.:|||..
 Frog   780 FPSLKKVQLPSLSKLPFKSIDQKFLEKSKTQLNHFLQNLLTDERLYQSEVLYAFLSPSPEHLKAI 844

  Fly   796 LPSPKKSKFSLSTLFRSDAGK--AHEASKATDPFWGLQRDDEDISTYLDGESGGEAKMLAADLDS 858
            ....|||.||:|:......|.  :|:..:.        .:|.|:|.|.|...|           .
 Frog   845 DIQGKKSSFSISSFLERFPGDLFSHQEDET--------EEDSDLSDYGDDVDG-----------K 890

  Fly   859 KDSIAEPMYALMGEIFDMGGVFKWLRKSLISFVQITYGRTINRQIRESVAYLFEESMLHNYFSAI 923
            ||::|||.:.|:.|||::.|:|||:||:||:.||||:|||||:|||::|.::|.|.||..|.:..
 Frog   891 KDALAEPCFMLIVEIFELRGMFKWVRKTLIALVQITFGRTINKQIRDTVNWIFSEQMLVYYINVF 955

  Fly   924 LKSFWPGGVLASAYPTRSEDMREMTTTAAKALLTDHIPEVLCNLVGAQAAKRGVLKVFDALQNPA 988
            ..:|||.|.||.:..:|:|...:.|...|:..|.::||:.|.||||.|.|:.|::|||:|||...
 Frog   956 RDAFWPNGKLAPSKTSRTELQCQETKQRAQQKLLENIPDALQNLVGQQNARHGIIKVFNALQENR 1020

  Fly   989 YNKQLFYELLEILMIEFFPEIRQLRVSNSN 1018
            .||.|.|.::|:|::|..||:|    |.||
 Frog  1021 ANKHLLYVMMELLLVELCPEVR----SQSN 1046

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snzNP_572421.1 PXA 142..300 CDD:460484 45/158 (28%)
RGS_SNX25 422..531 CDD:188675 40/108 (37%)
PX_SNX25 645..788 CDD:132788 47/142 (33%)
Nexin_C 882..987 CDD:462541 50/104 (48%)
snx25XP_004911239.1 PXA 212..368 CDD:460484 45/157 (29%)
RGS 504..612 CDD:470619 40/108 (37%)
PX_SNX25 715..837 CDD:132788 47/142 (33%)
Nexin_C 914..1020 CDD:462541 50/105 (48%)

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