DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and Gria3

DIOPT Version :10

Sequence 1:	NP_572411.1	Gene:	Ir7c / 31692	FlyBaseID:	FBgn0029966	Length:	625	Species:	Drosophila melanogaster
Sequence 2:	NP_058582.4	Gene:	Gria3 / 53623	MGIID:	95810	Length:	888	Species:	Mus musculus

Alignment Length:	36	Identity:	10/36 - (27%)
Similarity:	17/36 - (47%)	Gaps:	5/36 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   247 VLMNATTSFGIFCWFNRNTVPHMITRHCHWLSHREA 282
            :.|:...|||.    :..:..|::..|| |..:.||
Mouse   348 LFMHPDLSFGT----HTGSCGHIMHSHC-WQRYFEA 378

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ir7c	NP_572411.1	Lig_chan-Glu_bd	225..287	CDD:214911	10/36 (28%)
Ir7c	NP_572411.1	Lig_chan	343..592	CDD:459656
Gria3	NP_058582.4	PBP1_iGluR_AMPA_GluR3	29..403	CDD:380610	10/36 (28%)
Gria3	NP_058582.4	PBP2_iGluR_AMPA	416..799	CDD:270433
Blue background indicates that the domain is not in the aligned region.

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