DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and grid2

DIOPT Version :10

Sequence 1:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:272 Identity:66/272 - (24%)
Similarity:109/272 - (40%) Gaps:44/272 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 GLTKPLFPRKL-TNMHGCEMVVATFEHRPYVIIEDD----PKTPGGRSIHGIEGLIFRSLAERMN 257
            ||...|..||| .||.|..:.|.|....|:|::.::    ||...|.||.     :..:||..:.
Zfish   424 GLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGFSID-----VLDALANYLG 483

  Fly   258 FTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPIVLV 322
            |..::....|...|....||.:.|::..:|....::.......:..|..::..:|.|..:.:.::
Zfish   484 FKYEIYVAPDHKYGSQQADGTWNGLIGELVFKRADVGLSALTITPERESVVDFTTRYMDYSVGVL 548

  Fly   323 VPSGGSISPMGRLTRPFRYIIWSCILVSLIFGFVLICLLKITALPGLRNLVLGRRNRLPFMGMWA 387
            :........|.....||...:|:||..:::....|:.||.....|           ||| ||..:
Zfish   549 LRKAERTVDMFACLAPFDLSLWACIAGTVLLVGTLVYLLNWLNPP-----------RLP-MGSVS 601

  Fly   388 SLLGGLALYN----------------PQRNFA-RYILVMWLLQTLILRAAYTGQLYLLLQDVEMR 435
            |    ..|||                |....| |.::.:|.|..||:.::||..|...|....:.
Zfish   602 S----TTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTISRIE 662

  Fly   436 SPIKSLSEVLAK 447
            :.|:||.: |||
Zfish   663 NSIQSLQD-LAK 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 15/65 (23%)
Lig_chan 343..592 CDD:459656 33/122 (27%)
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..429 CDD:380614 2/4 (50%)
PBP2_iGluR_delta_2 440..806 CDD:270449 58/256 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.

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