DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and Ir25a

DIOPT Version :10

Sequence 1:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster


Alignment Length:474 Identity:89/474 - (18%)
Similarity:172/474 - (36%) Gaps:93/474 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 VATFEHRPYVIIEDDPKTPGGRSIHGIEGLIFRSLAERMNFTIKLVEQKDKNRGEILPDGNFTGI 282
            :.|....|:::  .|...|.|...:.|:  :...:|..::|...:.|.:|...|.:..:|.:.||
  Fly   443 IFTVVQAPFIM--RDETAPKGYKGYCID--LINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGI 503

  Fly   283 LKMMVDGEVNLTFVCFMYSKARS---DLMLPSTSYTSFPIVLVVPSGGSISPMGRLTRPFRYIIW 344
            :|.::|.:.::..........|.   |..:|........|::..||  |.|.:.:........:|
  Fly   504 VKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPS--SPSSLFKFLTVLETNVW 566

  Fly   345 SCILVSLIFGFVLICLLKITALPGLRNLVLGRRNRLPFMG------------MWASLL------G 391
            .|||.:..|...|:.:....:....:|      ||..:..            :|..:.      |
  Fly   567 LCILAAYFFTSFLMWIFDRWSPYSYQN------NREKYKDDEEKREFNLKECLWFCMTSLTPQGG 625

  Fly   392 GLALYNPQRNFARYILVMWLLQTLILRAAYTGQLYLLLQDVEMRSPIKSLSEVLAKDYEFRILPA 456
            |.|   |:....|.:...|.|...|:.|:||..|...|....:.:|::||.: |||.|:....| 
  Fly   626 GEA---PKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDD-LAKQYKILYAP- 685

  Fly   457 LRTIFKDSMPTTNFHAVLSLEESLYR------LRDE------------DDP----------GITV 493
                ...|...|.|..:.::|:..|.      |.|.            |.|          .:..
  Fly   686 ----LNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQE 746

  Fly   494 ALLQPTVNQ-------------FDF-RSGPNKRHLTVLPDPLMTAPLTFYMRPH-------SYFK 537
            |.|..|:::             |.| ....:.|:|.:....|......|..:|:       |:.|
  Fly   747 AKLPATLDEAVARVRNSTAATGFAFLGDATDIRYLQLTNCDLQVVGEEFSRKPYAIAVQQGSHLK 811

  Fly   538 RRIDRLIMAMMSSGIVARYRKMYMDRIKRVSKRRNLEPKP--LSIWRLSGIFVCCAGLYLVALIV 600
            .:.:..|:.:::...:.:.::.:....:.::|....|.:.  :||..:.|:|:.......:|.|.
  Fly   812 DQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGISIQNIGGVFIVIFVGIGMACIT 876

  Fly   601 FILEILTTNHRRLRRAFNV 619
            .:.|.....:|:..|..:|
  Fly   877 LVFEYWWYRYRKNPRIIDV 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 14/61 (23%)
Lig_chan 343..592 CDD:459656 59/317 (19%)
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606
PBP2_iGluR_putative 438..836 CDD:270435 77/413 (19%)
Blue background indicates that the domain is not in the aligned region.

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