DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir7c and grid2

DIOPT Version :10

Sequence 1:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_031759030.1 Gene:grid2 / 100487676 XenbaseID:XB-GENE-955038 Length:1007 Species:Xenopus tropicalis


Alignment Length:484 Identity:92/484 - (19%)
Similarity:169/484 - (34%) Gaps:135/484 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 GLTKPLFPRKL-TNMHGCEMVVATFEHRPYVIIEDD----PKTPGGRSIHGIEGLIFRSLAERMN 257
            ||...|..||| .||.|..:.|||....|:|::.::    ||...|.||.     :..:|:..:.
 Frog   424 GLNGSLTDRKLENNMRGVVLRVATVLEEPFVMVSENVLGKPKKYQGFSID-----VLDALSSYLG 483

  Fly   258 FTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFMYSKARSDLMLPSTSYTSFPIVLV 322
            |..::....|...|....||::.|::..::....::.......:..|.:::..:|.|..:.:.::
 Frog   484 FKYEIYVASDHKYGSPQADGSWNGLIGELLLKRADMGISALTITPDRENVVDFTTRYMDYSVGVL 548

  Fly   323 VPSGGSISPMGRLTRPFRYIIWSCILVSLIFGFVLICLLKITALPGLRNLVLGRRNRLPFMGMWA 387
            :........|.....||...:|:||..:::...:|:.||.....|.|:            ||...
 Frog   549 LRKAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQ------------MGSMT 601

  Fly   388 SLLGGLALYN----------------PQRNFA-RYILVMWLLQTLILRAAYTGQLYLLLQDVEMR 435
            |    ..|||                |....| |.::..|.|..||:.::||..|...|....:.
 Frog   602 S----TTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTISRIE 662

  Fly   436 SPIKSLSEVLAKD------------YEFRILPALRTIFKDSMPTTNFHAV-------LSLEESL- 480
            |.|:||.::..:.            ||...:..:....:|||.:..:..:       .:::||| 
 Frog   663 SSIQSLQDLSRQTDIPYGTVFDSAVYEHVRVKGMNPFERDSMYSQMWRMINRSNGSENNVQESLE 727

  Fly   481 ---------------------YRLRDED-----------DPGITVALLQPTVNQFDFRSGPNKRH 513
                                 ..:.|:|           |.|..:||          :.|...|.
 Frog   728 GIQKVKHGNYAFVWDAAVLEYIAINDQDCSFYTVGNTIADRGYGIAL----------QHGSPYRD 782

  Fly   514 LTVLPDPLMTAPLTFYMRPHSYFKRRIDRLIMAMMSSGIVARYRKMYMDRIKRVSKRRNLEPK-- 576
            :                     |.:|    |:.:..:|.:...:..:..|..:.....:::.|  
 Frog   783 I---------------------FSQR----ILELQQNGDMDILKHKWWPRNGQCELHSSMDTKQK 822

  Fly   577 --PLSIWRLSGIF-VCCAGLYLVALIVFI 602
              .|.|...||:| :..||:.|...|..:
 Frog   823 GSSLDIKSFSGVFCILAAGIVLSCFIAMV 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 14/65 (22%)
Lig_chan 343..592 CDD:459656 56/322 (17%)
grid2XP_031759030.1 Periplasmic_Binding_Protein_type1 28..429 CDD:471960 2/4 (50%)
PBP2_iGluR_delta_2 440..806 CDD:270449 73/421 (17%)

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